Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KLHL1Q9NR64 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
KLHL1Q9NR64 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.34■□□□□ 0.21
KLHL1Q9NR64 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
KLHL1Q9NR64 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.34■□□□□ 0.21
KLHL1Q9NR64 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
KLHL1Q9NR64 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KLHL1Q9NR64 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KLHL1Q9NR64 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KLHL1Q9NR64 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
KLHL1Q9NR64 AC009053.2-201ENST00000563701 2365 ntBASIC16.34■□□□□ 0.21
KLHL1Q9NR64 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
KLHL1Q9NR64 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.34■□□□□ 0.21
KLHL1Q9NR64 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.34■□□□□ 0.21
KLHL1Q9NR64 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KLHL1Q9NR64 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.33■□□□□ 0.21
KLHL1Q9NR64 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
KLHL1Q9NR64 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
KLHL1Q9NR64 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.33■□□□□ 0.21
KLHL1Q9NR64 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.33■□□□□ 0.21
KLHL1Q9NR64 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
KLHL1Q9NR64 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KLHL1Q9NR64 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 RBM17P3-201ENST00000417687 1192 ntBASIC16.33■□□□□ 0.2
KLHL1Q9NR64 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 SCARNA2-201ENST00000458748 420 ntBASIC16.33■□□□□ 0.2
KLHL1Q9NR64 AC093909.1-201ENST00000504731 1122 ntBASIC16.33■□□□□ 0.2
KLHL1Q9NR64 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.33■□□□□ 0.2
KLHL1Q9NR64 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KLHL1Q9NR64 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 IL9RP2-201ENST00000423948 1312 ntBASIC16.32■□□□□ 0.2
KLHL1Q9NR64 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 ABCD1P5-201ENST00000445663 754 ntBASIC16.32■□□□□ 0.2
KLHL1Q9NR64 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 RNA5SP419-201ENST00000515908 135 ntBASIC16.32■□□□□ 0.2
KLHL1Q9NR64 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 AP005117.1-201ENST00000584346 1413 ntBASIC16.32■□□□□ 0.2
KLHL1Q9NR64 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 BX640515.1-201ENST00000617215 977 ntBASIC16.32■□□□□ 0.2
KLHL1Q9NR64 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
KLHL1Q9NR64 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
KLHL1Q9NR64 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KLHL1Q9NR64 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
KLHL1Q9NR64 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KLHL1Q9NR64 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms