Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM7Q9NR12 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PDLIM7Q9NR12 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.25■□□□□ 0.67
PDLIM7Q9NR12 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.25■□□□□ 0.67
PDLIM7Q9NR12 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM7Q9NR12 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PDLIM7Q9NR12 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM7Q9NR12 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.25■□□□□ 0.67
PDLIM7Q9NR12 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM7Q9NR12 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PDLIM7Q9NR12 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM7Q9NR12 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.25■□□□□ 0.67
PDLIM7Q9NR12 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM7Q9NR12 AC093214.1-201ENST00000511688 1107 ntBASIC19.25■□□□□ 0.67
PDLIM7Q9NR12 RNA5SP421-201ENST00000516864 134 ntBASIC19.25■□□□□ 0.67
PDLIM7Q9NR12 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.25■□□□□ 0.67
PDLIM7Q9NR12 AL353135.1-201ENST00000606729 504 ntBASIC19.25■□□□□ 0.67
PDLIM7Q9NR12 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.25■□□□□ 0.67
PDLIM7Q9NR12 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM7Q9NR12 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM7Q9NR12 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
PDLIM7Q9NR12 AC018470.1-201ENST00000624790 3129 ntBASIC19.25■□□□□ 0.67
PDLIM7Q9NR12 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM7Q9NR12 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 LINC00982-205ENST00000420957 435 ntBASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 ACTG1P4-201ENST00000425123 1122 ntBASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 ADH5P3-201ENST00000433842 1137 ntBASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 DUX4L27-201ENST00000554796 1261 ntBASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 AC063926.2-201ENST00000623766 1308 ntBASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PDLIM7Q9NR12 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 AC092919.2-201ENST00000623631 1645 ntBASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 AC067863.1-201ENST00000494933 530 ntBASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 CXCL1P1-201ENST00000502804 216 ntBASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 AC012645.4-201ENST00000610691 1061 ntBASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 AC009093.7-201ENST00000623853 1223 ntBASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDLIM7Q9NR12 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PDLIM7Q9NR12 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.22■□□□□ 0.67
PDLIM7Q9NR12 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.22■□□□□ 0.67
PDLIM7Q9NR12 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDLIM7Q9NR12 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDLIM7Q9NR12 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDLIM7Q9NR12 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDLIM7Q9NR12 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.22■□□□□ 0.67
PDLIM7Q9NR12 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.22■□□□□ 0.67
PDLIM7Q9NR12 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.22■□□□□ 0.67
PDLIM7Q9NR12 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
PDLIM7Q9NR12 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.22■□□□□ 0.67
PDLIM7Q9NR12 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms