Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.63■□□□□ 0.25
NECTIN3Q9NQS3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 COX5BP2-201ENST00000392354 334 ntBASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 AC111152.3-201ENST00000569699 673 ntBASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 OR6D1P-203ENST00000641209 4860 ntBASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NECTIN3Q9NQS3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 AL391005.1-201ENST00000623953 2435 ntBASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 AC132008.2-207ENST00000454517 770 ntBASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NECTIN3Q9NQS3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms