Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 AC106886.4-201ENST00000623557 2502 ntBASIC17.3■□□□□ 0.36
MRM3Q9HC36 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRM3Q9HC36 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.3■□□□□ 0.36
MRM3Q9HC36 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.3■□□□□ 0.36
MRM3Q9HC36 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRM3Q9HC36 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRM3Q9HC36 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MRM3Q9HC36 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRM3Q9HC36 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRM3Q9HC36 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRM3Q9HC36 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRM3Q9HC36 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRM3Q9HC36 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MRM3Q9HC36 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRM3Q9HC36 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRM3Q9HC36 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRM3Q9HC36 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRM3Q9HC36 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRM3Q9HC36 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRM3Q9HC36 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
MRM3Q9HC36 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MRM3Q9HC36 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
MRM3Q9HC36 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
MRM3Q9HC36 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.29■□□□□ 0.36
MRM3Q9HC36 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRM3Q9HC36 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRM3Q9HC36 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRM3Q9HC36 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
MRM3Q9HC36 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.29■□□□□ 0.36
MRM3Q9HC36 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.29■□□□□ 0.36
MRM3Q9HC36 KRT126P-201ENST00000549467 1181 ntBASIC17.29■□□□□ 0.36
MRM3Q9HC36 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.29■□□□□ 0.36
MRM3Q9HC36 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.29■□□□□ 0.36
MRM3Q9HC36 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRM3Q9HC36 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.29■□□□□ 0.36
MRM3Q9HC36 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.29■□□□□ 0.36
MRM3Q9HC36 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
MRM3Q9HC36 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
MRM3Q9HC36 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRM3Q9HC36 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRM3Q9HC36 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRM3Q9HC36 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRM3Q9HC36 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
MRM3Q9HC36 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.29■□□□□ 0.36
MRM3Q9HC36 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MRM3Q9HC36 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRM3Q9HC36 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MRM3Q9HC36 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MRM3Q9HC36 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.28■□□□□ 0.36
MRM3Q9HC36 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
MRM3Q9HC36 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
MRM3Q9HC36 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MRM3Q9HC36 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MRM3Q9HC36 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MRM3Q9HC36 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MRM3Q9HC36 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRM3Q9HC36 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.28■□□□□ 0.36
MRM3Q9HC36 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRM3Q9HC36 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.28■□□□□ 0.36
MRM3Q9HC36 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MRM3Q9HC36 AC099398.1-201ENST00000567919 2776 ntBASIC17.28■□□□□ 0.36
MRM3Q9HC36 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.28■□□□□ 0.36
MRM3Q9HC36 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
MRM3Q9HC36 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRM3Q9HC36 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MRM3Q9HC36 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MRM3Q9HC36 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
MRM3Q9HC36 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.28■□□□□ 0.36
MRM3Q9HC36 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MRM3Q9HC36 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.28■□□□□ 0.36
MRM3Q9HC36 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.28■□□□□ 0.36
MRM3Q9HC36 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.28■□□□□ 0.36
MRM3Q9HC36 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.28■□□□□ 0.36
MRM3Q9HC36 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRM3Q9HC36 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MRM3Q9HC36 AP005117.1-201ENST00000584346 1413 ntBASIC17.28■□□□□ 0.36
MRM3Q9HC36 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MRM3Q9HC36 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MRM3Q9HC36 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.28■□□□□ 0.36
MRM3Q9HC36 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRM3Q9HC36 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
MRM3Q9HC36 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MRM3Q9HC36 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRM3Q9HC36 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRM3Q9HC36 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRM3Q9HC36 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRM3Q9HC36 AGGF1P2-201ENST00000426656 2106 ntBASIC17.27■□□□□ 0.36
MRM3Q9HC36 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MRM3Q9HC36 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.27■□□□□ 0.36
MRM3Q9HC36 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
MRM3Q9HC36 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
MRM3Q9HC36 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRM3Q9HC36 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.27■□□□□ 0.36
MRM3Q9HC36 AC084018.2-201ENST00000613093 2607 ntBASIC17.27■□□□□ 0.36
MRM3Q9HC36 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
MRM3Q9HC36 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRM3Q9HC36 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRM3Q9HC36 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRM3Q9HC36 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MRM3Q9HC36 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms