Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 SPCS2P4-201ENST00000436160 681 ntBASIC18.8■□□□□ 0.6
HIPK3Q9H422 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.8■□□□□ 0.6
HIPK3Q9H422 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.8■□□□□ 0.6
HIPK3Q9H422 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK3Q9H422 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.8■□□□□ 0.6
HIPK3Q9H422 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.8■□□□□ 0.6
HIPK3Q9H422 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.8■□□□□ 0.6
HIPK3Q9H422 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.8■□□□□ 0.6
HIPK3Q9H422 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK3Q9H422 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK3Q9H422 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
HIPK3Q9H422 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
HIPK3Q9H422 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK3Q9H422 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK3Q9H422 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
HIPK3Q9H422 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIPK3Q9H422 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HIPK3Q9H422 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.79■□□□□ 0.6
HIPK3Q9H422 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK3Q9H422 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK3Q9H422 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK3Q9H422 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK3Q9H422 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.79■□□□□ 0.6
HIPK3Q9H422 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK3Q9H422 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HIPK3Q9H422 GK-202ENST00000378941 458 ntTSL 3 BASIC18.79■□□□□ 0.6
HIPK3Q9H422 TREML5P-201ENST00000421694 576 ntBASIC18.79■□□□□ 0.6
HIPK3Q9H422 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.79■□□□□ 0.6
HIPK3Q9H422 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.79■□□□□ 0.6
HIPK3Q9H422 IGHV3-62-201ENST00000520057 340 ntBASIC18.79■□□□□ 0.6
HIPK3Q9H422 IGHV3-42-201ENST00000520410 361 ntBASIC18.79■□□□□ 0.6
HIPK3Q9H422 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.79■□□□□ 0.6
HIPK3Q9H422 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.79■□□□□ 0.6
HIPK3Q9H422 AC140878.1-201ENST00000565277 250 ntBASIC18.79■□□□□ 0.6
HIPK3Q9H422 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.79■□□□□ 0.6
HIPK3Q9H422 MIR4515-201ENST00000584082 81 ntBASIC18.79■□□□□ 0.6
HIPK3Q9H422 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.79■□□□□ 0.6
HIPK3Q9H422 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.79■□□□□ 0.6
HIPK3Q9H422 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
HIPK3Q9H422 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK3Q9H422 AL390754.1-201ENST00000619088 582 ntBASIC18.79■□□□□ 0.6
HIPK3Q9H422 AL161645.1-201ENST00000622716 1255 ntBASIC18.79■□□□□ 0.6
HIPK3Q9H422 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HIPK3Q9H422 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HIPK3Q9H422 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK3Q9H422 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK3Q9H422 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HIPK3Q9H422 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HIPK3Q9H422 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.79■□□□□ 0.6
HIPK3Q9H422 WIZP1-201ENST00000531444 2299 ntBASIC18.79■□□□□ 0.6
HIPK3Q9H422 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIPK3Q9H422 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK3Q9H422 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK3Q9H422 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK3Q9H422 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK3Q9H422 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK3Q9H422 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.78■□□□□ 0.6
HIPK3Q9H422 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK3Q9H422 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.78■□□□□ 0.6
HIPK3Q9H422 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.78■□□□□ 0.6
HIPK3Q9H422 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.78■□□□□ 0.6
HIPK3Q9H422 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK3Q9H422 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK3Q9H422 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK3Q9H422 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK3Q9H422 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK3Q9H422 FAM207CP-201ENST00000443486 507 ntBASIC18.78■□□□□ 0.6
HIPK3Q9H422 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.78■□□□□ 0.6
HIPK3Q9H422 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.78■□□□□ 0.6
HIPK3Q9H422 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HIPK3Q9H422 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.78■□□□□ 0.6
HIPK3Q9H422 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.78■□□□□ 0.6
HIPK3Q9H422 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.78■□□□□ 0.6
HIPK3Q9H422 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
HIPK3Q9H422 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK3Q9H422 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.78■□□□□ 0.6
HIPK3Q9H422 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK3Q9H422 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK3Q9H422 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIPK3Q9H422 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.78■□□□□ 0.6
HIPK3Q9H422 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIPK3Q9H422 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
HIPK3Q9H422 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
HIPK3Q9H422 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIPK3Q9H422 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.77■□□□□ 0.6
HIPK3Q9H422 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.77■□□□□ 0.6
HIPK3Q9H422 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIPK3Q9H422 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HIPK3Q9H422 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HIPK3Q9H422 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.77■□□□□ 0.6
HIPK3Q9H422 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.77■□□□□ 0.6
HIPK3Q9H422 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.77■□□□□ 0.6
HIPK3Q9H422 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.77■□□□□ 0.6
HIPK3Q9H422 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.77■□□□□ 0.6
HIPK3Q9H422 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.77■□□□□ 0.6
HIPK3Q9H422 SLC25A39P2-201ENST00000537614 270 ntBASIC18.77■□□□□ 0.6
HIPK3Q9H422 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.77■□□□□ 0.6
HIPK3Q9H422 LINC02560-201ENST00000596379 459 ntBASIC18.77■□□□□ 0.6
HIPK3Q9H422 AC008761.3-201ENST00000624803 892 ntBASIC18.77■□□□□ 0.6
HIPK3Q9H422 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms