Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 MIR149-201ENST00000384879 89 ntBASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 ACTBP11-201ENST00000436287 1126 ntBASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 AC099568.2-201ENST00000609194 695 ntBASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.43■□□□□ 0.22
CNTNAP3Q9BZ76 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 AL138781.2-201ENST00000617896 1843 ntBASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 AP006294.1-201ENST00000415407 339 ntBASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 AC100757.3-201ENST00000622361 1406 ntBASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 AC099343.3-201ENST00000605834 2503 ntBASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNTNAP3Q9BZ76 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 AC148477.5-201ENST00000625164 1645 ntBASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 DGCR5-201ENST00000399539 862 ntBASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 AL513480.1-201ENST00000451731 511 ntBASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 API5-211ENST00000534695 560 ntTSL 5 BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 AC104794.3-201ENST00000566840 1248 ntBASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 AL590560.3-201ENST00000623350 461 ntBASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP3Q9BZ76 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNTNAP3Q9BZ76 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CNTNAP3Q9BZ76 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CNTNAP3Q9BZ76 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.4■□□□□ 0.22
CNTNAP3Q9BZ76 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms