Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
KRTAP4-3Q9BYR4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 PC-214ENST00000628663 1470 ntTSL 5 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 AC025580.3-201ENST00000617932 1424 ntBASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 BCAR1-209ENST00000546196 1340 ntBASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 AC092473.1-201ENST00000441098 221 ntBASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 AL591424.1-201ENST00000442569 1213 ntBASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 AL031432.2-201ENST00000566714 459 ntBASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 AL928711.1-201ENST00000570165 459 ntBASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 MIR4469-201ENST00000583919 79 ntBASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 AP001160.2-201ENST00000596071 487 ntBASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 AL139327.4-201ENST00000612362 153 ntBASIC5.86□□□□□ -1.47
KRTAP4-3Q9BYR4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms