Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 IGHGP-201ENST00000390555 1178 ntBASIC13.16□□□□□ -0.3
VGLL1Q99990 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.16□□□□□ -0.3
VGLL1Q99990 FAM8A6P-201ENST00000407496 1135 ntBASIC13.16□□□□□ -0.3
VGLL1Q99990 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.16□□□□□ -0.3
VGLL1Q99990 LIN28AP1-201ENST00000429574 405 ntBASIC13.16□□□□□ -0.3
VGLL1Q99990 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.16□□□□□ -0.3
VGLL1Q99990 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.16□□□□□ -0.3
VGLL1Q99990 SLC25A3P1-201ENST00000443844 931 ntBASIC13.16□□□□□ -0.3
VGLL1Q99990 MTCL1P1-201ENST00000446207 792 ntBASIC13.16□□□□□ -0.3
VGLL1Q99990 AC092597.1-201ENST00000487352 616 ntBASIC13.16□□□□□ -0.3
VGLL1Q99990 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.16□□□□□ -0.3
VGLL1Q99990 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.16□□□□□ -0.3
VGLL1Q99990 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.16□□□□□ -0.3
VGLL1Q99990 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.16□□□□□ -0.3
VGLL1Q99990 AL031432.5-201ENST00000641059 760 ntBASIC13.16□□□□□ -0.3
VGLL1Q99990 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.16□□□□□ -0.3
VGLL1Q99990 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
VGLL1Q99990 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 AL353692.3-201ENST00000407031 1396 ntBASIC13.16□□□□□ -0.3
VGLL1Q99990 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
VGLL1Q99990 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
VGLL1Q99990 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VGLL1Q99990 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VGLL1Q99990 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VGLL1Q99990 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
VGLL1Q99990 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VGLL1Q99990 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VGLL1Q99990 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.15□□□□□ -0.3
VGLL1Q99990 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VGLL1Q99990 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VGLL1Q99990 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VGLL1Q99990 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.15□□□□□ -0.3
VGLL1Q99990 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VGLL1Q99990 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VGLL1Q99990 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VGLL1Q99990 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
VGLL1Q99990 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.15□□□□□ -0.3
VGLL1Q99990 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VGLL1Q99990 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VGLL1Q99990 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
VGLL1Q99990 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
VGLL1Q99990 ATP5G1P1-201ENST00000448724 379 ntBASIC13.15□□□□□ -0.3
VGLL1Q99990 AC068472.1-201ENST00000474589 881 ntBASIC13.15□□□□□ -0.3
VGLL1Q99990 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VGLL1Q99990 COX11P1-201ENST00000489116 835 ntBASIC13.15□□□□□ -0.3
VGLL1Q99990 AP003733.1-201ENST00000491725 852 ntBASIC13.15□□□□□ -0.3
VGLL1Q99990 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VGLL1Q99990 AC010203.1-204ENST00000548782 407 ntBASIC13.15□□□□□ -0.3
VGLL1Q99990 ZNF444P1-201ENST00000559497 298 ntBASIC13.15□□□□□ -0.3
VGLL1Q99990 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.15□□□□□ -0.3
VGLL1Q99990 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.15□□□□□ -0.3
VGLL1Q99990 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.15□□□□□ -0.3
VGLL1Q99990 AC145285.6-201ENST00000604632 637 ntBASIC13.15□□□□□ -0.3
VGLL1Q99990 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VGLL1Q99990 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VGLL1Q99990 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
VGLL1Q99990 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.15□□□□□ -0.3
VGLL1Q99990 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
VGLL1Q99990 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
VGLL1Q99990 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC13.15□□□□□ -0.3
VGLL1Q99990 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VGLL1Q99990 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.15□□□□□ -0.3
VGLL1Q99990 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.15□□□□□ -0.3
VGLL1Q99990 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.15□□□□□ -0.3
VGLL1Q99990 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.31
VGLL1Q99990 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
VGLL1Q99990 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.15□□□□□ -0.31
VGLL1Q99990 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC13.15□□□□□ -0.31
VGLL1Q99990 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC13.14□□□□□ -0.31
VGLL1Q99990 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
VGLL1Q99990 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.14□□□□□ -0.31
VGLL1Q99990 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.14□□□□□ -0.31
VGLL1Q99990 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.14□□□□□ -0.31
VGLL1Q99990 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.14□□□□□ -0.31
VGLL1Q99990 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
VGLL1Q99990 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.14□□□□□ -0.31
VGLL1Q99990 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.14□□□□□ -0.31
VGLL1Q99990 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms