Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SEMA3CQ99985 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.55■□□□□ 0.4
SEMA3CQ99985 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SEMA3CQ99985 AC093525.9-201ENST00000624961 1746 ntBASIC17.55■□□□□ 0.4
SEMA3CQ99985 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.55■□□□□ 0.4
SEMA3CQ99985 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SEMA3CQ99985 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
SEMA3CQ99985 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SEMA3CQ99985 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SEMA3CQ99985 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.55■□□□□ 0.4
SEMA3CQ99985 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SEMA3CQ99985 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SEMA3CQ99985 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SEMA3CQ99985 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SEMA3CQ99985 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SEMA3CQ99985 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SEMA3CQ99985 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SEMA3CQ99985 SLC25A1P3-201ENST00000395415 828 ntBASIC17.55■□□□□ 0.4
SEMA3CQ99985 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SEMA3CQ99985 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SEMA3CQ99985 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.55■□□□□ 0.4
SEMA3CQ99985 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.55■□□□□ 0.4
SEMA3CQ99985 AC009078.2-202ENST00000463353 338 ntBASIC17.55■□□□□ 0.4
SEMA3CQ99985 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.55■□□□□ 0.4
SEMA3CQ99985 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.55■□□□□ 0.4
SEMA3CQ99985 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.55■□□□□ 0.4
SEMA3CQ99985 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.55■□□□□ 0.4
SEMA3CQ99985 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.55■□□□□ 0.4
SEMA3CQ99985 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.55■□□□□ 0.4
SEMA3CQ99985 AC064862.7-201ENST00000604520 867 ntBASIC17.55■□□□□ 0.4
SEMA3CQ99985 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SEMA3CQ99985 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SEMA3CQ99985 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SEMA3CQ99985 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SEMA3CQ99985 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SEMA3CQ99985 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SEMA3CQ99985 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SEMA3CQ99985 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SEMA3CQ99985 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA3CQ99985 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SEMA3CQ99985 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA3CQ99985 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SEMA3CQ99985 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA3CQ99985 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA3CQ99985 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.54■□□□□ 0.4
SEMA3CQ99985 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA3CQ99985 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA3CQ99985 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA3CQ99985 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA3CQ99985 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.54■□□□□ 0.4
SEMA3CQ99985 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA3CQ99985 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SEMA3CQ99985 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA3CQ99985 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.54■□□□□ 0.4
SEMA3CQ99985 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA3CQ99985 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA3CQ99985 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.54■□□□□ 0.4
SEMA3CQ99985 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.54■□□□□ 0.4
SEMA3CQ99985 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.54■□□□□ 0.4
SEMA3CQ99985 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.54■□□□□ 0.4
SEMA3CQ99985 LINC00982-205ENST00000420957 435 ntBASIC17.54■□□□□ 0.4
SEMA3CQ99985 ACTG1P4-201ENST00000425123 1122 ntBASIC17.54■□□□□ 0.4
SEMA3CQ99985 FAM197Y8-203ENST00000450145 560 ntBASIC17.54■□□□□ 0.4
SEMA3CQ99985 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SEMA3CQ99985 AC025062.2-201ENST00000605477 670 ntBASIC17.54■□□□□ 0.4
SEMA3CQ99985 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SEMA3CQ99985 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA3CQ99985 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.54■□□□□ 0.4
SEMA3CQ99985 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA3CQ99985 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SEMA3CQ99985 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA3CQ99985 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA3CQ99985 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SEMA3CQ99985 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA3CQ99985 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.54■□□□□ 0.4
SEMA3CQ99985 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA3CQ99985 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA3CQ99985 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.53■□□□□ 0.4
SEMA3CQ99985 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SEMA3CQ99985 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA3CQ99985 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.53■□□□□ 0.4
SEMA3CQ99985 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.53■□□□□ 0.4
SEMA3CQ99985 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA3CQ99985 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA3CQ99985 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SEMA3CQ99985 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA3CQ99985 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA3CQ99985 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA3CQ99985 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA3CQ99985 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA3CQ99985 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA3CQ99985 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA3CQ99985 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA3CQ99985 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA3CQ99985 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.53■□□□□ 0.4
SEMA3CQ99985 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.53■□□□□ 0.4
SEMA3CQ99985 RNPS1P1-201ENST00000507437 918 ntBASIC17.53■□□□□ 0.4
SEMA3CQ99985 AC073648.2-201ENST00000510116 352 ntBASIC17.53■□□□□ 0.4
SEMA3CQ99985 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.53■□□□□ 0.4
SEMA3CQ99985 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms