Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE1Q99829 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE1Q99829 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CPNE1Q99829 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE1Q99829 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE1Q99829 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.3■□□□□ 0.36
CPNE1Q99829 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CPNE1Q99829 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.3■□□□□ 0.36
CPNE1Q99829 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE1Q99829 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE1Q99829 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.3■□□□□ 0.36
CPNE1Q99829 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.3■□□□□ 0.36
CPNE1Q99829 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.3■□□□□ 0.36
CPNE1Q99829 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE1Q99829 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.3■□□□□ 0.36
CPNE1Q99829 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.3■□□□□ 0.36
CPNE1Q99829 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE1Q99829 STK19B-204ENST00000512515 211 ntBASIC17.3■□□□□ 0.36
CPNE1Q99829 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
CPNE1Q99829 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE1Q99829 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE1Q99829 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.3■□□□□ 0.36
CPNE1Q99829 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.3■□□□□ 0.36
CPNE1Q99829 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE1Q99829 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE1Q99829 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE1Q99829 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE1Q99829 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.3■□□□□ 0.36
CPNE1Q99829 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE1Q99829 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE1Q99829 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CPNE1Q99829 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE1Q99829 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CPNE1Q99829 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE1Q99829 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE1Q99829 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE1Q99829 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE1Q99829 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.29■□□□□ 0.36
CPNE1Q99829 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE1Q99829 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CPNE1Q99829 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CPNE1Q99829 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE1Q99829 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE1Q99829 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE1Q99829 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE1Q99829 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.29■□□□□ 0.36
CPNE1Q99829 VENTXP7-201ENST00000475503 772 ntBASIC17.29■□□□□ 0.36
CPNE1Q99829 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE1Q99829 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CPNE1Q99829 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE1Q99829 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE1Q99829 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE1Q99829 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE1Q99829 AC078925.2-201ENST00000624013 1973 ntBASIC17.29■□□□□ 0.36
CPNE1Q99829 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE1Q99829 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.29■□□□□ 0.36
CPNE1Q99829 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.29■□□□□ 0.36
CPNE1Q99829 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE1Q99829 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.29■□□□□ 0.36
CPNE1Q99829 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CPNE1Q99829 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CPNE1Q99829 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
CPNE1Q99829 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPNE1Q99829 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.28■□□□□ 0.36
CPNE1Q99829 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE1Q99829 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE1Q99829 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE1Q99829 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE1Q99829 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE1Q99829 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE1Q99829 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE1Q99829 PCDHB19P-201ENST00000570871 2371 ntBASIC17.28■□□□□ 0.36
CPNE1Q99829 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CPNE1Q99829 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CPNE1Q99829 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE1Q99829 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE1Q99829 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE1Q99829 AC003669.1-201ENST00000334569 611 ntBASIC17.28■□□□□ 0.36
CPNE1Q99829 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE1Q99829 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE1Q99829 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.28■□□□□ 0.36
CPNE1Q99829 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE1Q99829 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE1Q99829 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE1Q99829 RN7SL850P-201ENST00000579959 291 ntBASIC17.28■□□□□ 0.36
CPNE1Q99829 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.28■□□□□ 0.36
CPNE1Q99829 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE1Q99829 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE1Q99829 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE1Q99829 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE1Q99829 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE1Q99829 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE1Q99829 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE1Q99829 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CPNE1Q99829 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CPNE1Q99829 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE1Q99829 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.28■□□□□ 0.36
CPNE1Q99829 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPNE1Q99829 RNF216P1-203ENST00000404404 2427 ntBASIC17.28■□□□□ 0.36
CPNE1Q99829 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms