Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAD9AQ99638 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAD9AQ99638 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.34■□□□□ 0.53
RAD9AQ99638 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAD9AQ99638 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAD9AQ99638 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAD9AQ99638 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.34■□□□□ 0.53
RAD9AQ99638 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.34■□□□□ 0.53
RAD9AQ99638 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.34■□□□□ 0.53
RAD9AQ99638 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.34■□□□□ 0.53
RAD9AQ99638 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RAD9AQ99638 CR383656.12-201ENST00000549567 513 ntBASIC18.34■□□□□ 0.53
RAD9AQ99638 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RAD9AQ99638 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.34■□□□□ 0.53
RAD9AQ99638 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.34■□□□□ 0.53
RAD9AQ99638 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.34■□□□□ 0.53
RAD9AQ99638 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAD9AQ99638 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAD9AQ99638 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAD9AQ99638 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.34■□□□□ 0.53
RAD9AQ99638 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAD9AQ99638 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.33■□□□□ 0.53
RAD9AQ99638 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RAD9AQ99638 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAD9AQ99638 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAD9AQ99638 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAD9AQ99638 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
RAD9AQ99638 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
RAD9AQ99638 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RAD9AQ99638 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAD9AQ99638 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAD9AQ99638 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.33■□□□□ 0.52
RAD9AQ99638 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.33■□□□□ 0.52
RAD9AQ99638 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RAD9AQ99638 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAD9AQ99638 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAD9AQ99638 CRB3P1-201ENST00000449338 276 ntBASIC18.33■□□□□ 0.52
RAD9AQ99638 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.33■□□□□ 0.52
RAD9AQ99638 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.33■□□□□ 0.52
RAD9AQ99638 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.33■□□□□ 0.52
RAD9AQ99638 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.33■□□□□ 0.52
RAD9AQ99638 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.33■□□□□ 0.52
RAD9AQ99638 AL139327.4-201ENST00000612362 153 ntBASIC18.33■□□□□ 0.52
RAD9AQ99638 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAD9AQ99638 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.33■□□□□ 0.52
RAD9AQ99638 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAD9AQ99638 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAD9AQ99638 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAD9AQ99638 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAD9AQ99638 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.33■□□□□ 0.52
RAD9AQ99638 AC012569.1-201ENST00000591191 1524 ntBASIC18.33■□□□□ 0.52
RAD9AQ99638 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.32■□□□□ 0.52
RAD9AQ99638 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAD9AQ99638 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.32■□□□□ 0.52
RAD9AQ99638 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.32■□□□□ 0.52
RAD9AQ99638 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.32■□□□□ 0.52
RAD9AQ99638 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.32■□□□□ 0.52
RAD9AQ99638 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
RAD9AQ99638 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.32■□□□□ 0.52
RAD9AQ99638 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.32■□□□□ 0.52
RAD9AQ99638 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAD9AQ99638 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.32■□□□□ 0.52
RAD9AQ99638 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAD9AQ99638 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAD9AQ99638 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RAD9AQ99638 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RAD9AQ99638 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.32■□□□□ 0.52
RAD9AQ99638 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.32■□□□□ 0.52
RAD9AQ99638 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAD9AQ99638 AC109635.5-201ENST00000533593 962 ntBASIC18.32■□□□□ 0.52
RAD9AQ99638 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.32■□□□□ 0.52
RAD9AQ99638 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.32■□□□□ 0.52
RAD9AQ99638 MIR6080-201ENST00000617359 66 ntBASIC18.32■□□□□ 0.52
RAD9AQ99638 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RAD9AQ99638 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.32■□□□□ 0.52
RAD9AQ99638 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.32■□□□□ 0.52
RAD9AQ99638 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.32■□□□□ 0.52
RAD9AQ99638 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RAD9AQ99638 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAD9AQ99638 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAD9AQ99638 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAD9AQ99638 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAD9AQ99638 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAD9AQ99638 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.32■□□□□ 0.52
RAD9AQ99638 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAD9AQ99638 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
RAD9AQ99638 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.31■□□□□ 0.52
RAD9AQ99638 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAD9AQ99638 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAD9AQ99638 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RAD9AQ99638 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAD9AQ99638 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RAD9AQ99638 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
RAD9AQ99638 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RAD9AQ99638 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAD9AQ99638 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.31■□□□□ 0.52
RAD9AQ99638 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.31■□□□□ 0.52
RAD9AQ99638 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.31■□□□□ 0.52
RAD9AQ99638 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.31■□□□□ 0.52
RAD9AQ99638 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms