Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
BBS4Q96RK4 RCN1P2-201ENST00000398357 915 ntBASIC16.43■□□□□ 0.22
BBS4Q96RK4 POM121L3P-201ENST00000419331 1163 ntBASIC16.43■□□□□ 0.22
BBS4Q96RK4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
BBS4Q96RK4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.43■□□□□ 0.22
BBS4Q96RK4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.43■□□□□ 0.22
BBS4Q96RK4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BBS4Q96RK4 AC099336.1-202ENST00000602961 463 ntBASIC16.43■□□□□ 0.22
BBS4Q96RK4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
BBS4Q96RK4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.43■□□□□ 0.22
BBS4Q96RK4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
BBS4Q96RK4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
BBS4Q96RK4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BBS4Q96RK4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BBS4Q96RK4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BBS4Q96RK4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
BBS4Q96RK4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
BBS4Q96RK4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.42■□□□□ 0.22
BBS4Q96RK4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BBS4Q96RK4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BBS4Q96RK4 AL353593.2-201ENST00000602529 1483 ntBASIC16.42■□□□□ 0.22
BBS4Q96RK4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.42■□□□□ 0.22
BBS4Q96RK4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
BBS4Q96RK4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BBS4Q96RK4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
BBS4Q96RK4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.42■□□□□ 0.22
BBS4Q96RK4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
BBS4Q96RK4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BBS4Q96RK4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BBS4Q96RK4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BBS4Q96RK4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.42■□□□□ 0.22
BBS4Q96RK4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BBS4Q96RK4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BBS4Q96RK4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BBS4Q96RK4 KLF4P1-201ENST00000412782 1185 ntBASIC16.42■□□□□ 0.22
BBS4Q96RK4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.42■□□□□ 0.22
BBS4Q96RK4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
BBS4Q96RK4 UPK3BP1-201ENST00000428678 509 ntBASIC16.42■□□□□ 0.22
BBS4Q96RK4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.42■□□□□ 0.22
BBS4Q96RK4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.42■□□□□ 0.22
BBS4Q96RK4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BBS4Q96RK4 AC114341.1-201ENST00000618070 349 ntBASIC16.42■□□□□ 0.22
BBS4Q96RK4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BBS4Q96RK4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.42■□□□□ 0.22
BBS4Q96RK4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.42■□□□□ 0.22
BBS4Q96RK4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
BBS4Q96RK4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.42■□□□□ 0.22
BBS4Q96RK4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
BBS4Q96RK4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
BBS4Q96RK4 INTS4P1-201ENST00000438455 1935 ntBASIC16.42■□□□□ 0.22
BBS4Q96RK4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BBS4Q96RK4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BBS4Q96RK4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
BBS4Q96RK4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BBS4Q96RK4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
BBS4Q96RK4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
BBS4Q96RK4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
BBS4Q96RK4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BBS4Q96RK4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.42■□□□□ 0.22
BBS4Q96RK4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BBS4Q96RK4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BBS4Q96RK4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BBS4Q96RK4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BBS4Q96RK4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BBS4Q96RK4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BBS4Q96RK4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BBS4Q96RK4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
BBS4Q96RK4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.41■□□□□ 0.22
BBS4Q96RK4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
BBS4Q96RK4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BBS4Q96RK4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BBS4Q96RK4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
BBS4Q96RK4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BBS4Q96RK4 AC003669.1-201ENST00000334569 611 ntBASIC16.41■□□□□ 0.22
BBS4Q96RK4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BBS4Q96RK4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.41■□□□□ 0.22
BBS4Q96RK4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.41■□□□□ 0.22
BBS4Q96RK4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.41■□□□□ 0.22
BBS4Q96RK4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.41■□□□□ 0.22
BBS4Q96RK4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.41■□□□□ 0.22
BBS4Q96RK4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.41■□□□□ 0.22
BBS4Q96RK4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
BBS4Q96RK4 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.41■□□□□ 0.22
BBS4Q96RK4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.41■□□□□ 0.22
BBS4Q96RK4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BBS4Q96RK4 AC073592.5-201ENST00000624854 528 ntBASIC16.41■□□□□ 0.22
BBS4Q96RK4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
BBS4Q96RK4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BBS4Q96RK4 AC080080.1-201ENST00000625121 2420 ntBASIC16.41■□□□□ 0.22
BBS4Q96RK4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
BBS4Q96RK4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BBS4Q96RK4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BBS4Q96RK4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BBS4Q96RK4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
BBS4Q96RK4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
BBS4Q96RK4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
BBS4Q96RK4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BBS4Q96RK4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BBS4Q96RK4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BBS4Q96RK4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms