Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX27Q96L92 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.61■□□□□ 0.57
SNX27Q96L92 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX27Q96L92 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.61■□□□□ 0.57
SNX27Q96L92 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.61■□□□□ 0.57
SNX27Q96L92 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.61■□□□□ 0.57
SNX27Q96L92 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SNX27Q96L92 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNX27Q96L92 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNX27Q96L92 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.6■□□□□ 0.57
SNX27Q96L92 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.6■□□□□ 0.57
SNX27Q96L92 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNX27Q96L92 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SNX27Q96L92 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNX27Q96L92 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
SNX27Q96L92 LTB4R2-202ENST00000528054 3092 ntBASIC18.6■□□□□ 0.57
SNX27Q96L92 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNX27Q96L92 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.6■□□□□ 0.57
SNX27Q96L92 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNX27Q96L92 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.6■□□□□ 0.57
SNX27Q96L92 SLC25A1P3-201ENST00000395415 828 ntBASIC18.6■□□□□ 0.57
SNX27Q96L92 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.6■□□□□ 0.57
SNX27Q96L92 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.6■□□□□ 0.57
SNX27Q96L92 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.6■□□□□ 0.57
SNX27Q96L92 SPCS2P1-201ENST00000561636 679 ntBASIC18.6■□□□□ 0.57
SNX27Q96L92 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNX27Q96L92 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNX27Q96L92 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNX27Q96L92 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNX27Q96L92 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNX27Q96L92 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SNX27Q96L92 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.59■□□□□ 0.57
SNX27Q96L92 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNX27Q96L92 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SNX27Q96L92 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.59■□□□□ 0.57
SNX27Q96L92 AC016396.2-201ENST00000562575 1417 ntBASIC18.59■□□□□ 0.57
SNX27Q96L92 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.59■□□□□ 0.57
SNX27Q96L92 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
SNX27Q96L92 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNX27Q96L92 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNX27Q96L92 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNX27Q96L92 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.59■□□□□ 0.57
SNX27Q96L92 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.59■□□□□ 0.57
SNX27Q96L92 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.59■□□□□ 0.57
SNX27Q96L92 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.59■□□□□ 0.57
SNX27Q96L92 AC040169.1-201ENST00000565382 521 ntBASIC18.59■□□□□ 0.57
SNX27Q96L92 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.59■□□□□ 0.57
SNX27Q96L92 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.59■□□□□ 0.57
SNX27Q96L92 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.59■□□□□ 0.57
SNX27Q96L92 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.59■□□□□ 0.57
SNX27Q96L92 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNX27Q96L92 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SNX27Q96L92 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SNX27Q96L92 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SNX27Q96L92 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNX27Q96L92 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNX27Q96L92 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SNX27Q96L92 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SNX27Q96L92 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SNX27Q96L92 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SNX27Q96L92 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SNX27Q96L92 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
SNX27Q96L92 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SNX27Q96L92 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SNX27Q96L92 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNX27Q96L92 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SNX27Q96L92 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.58■□□□□ 0.56
SNX27Q96L92 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNX27Q96L92 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SNX27Q96L92 DNAJB3-201ENST00000446806 729 ntBASIC18.58■□□□□ 0.56
SNX27Q96L92 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.58■□□□□ 0.56
SNX27Q96L92 PARP8-218ENST00000513738 596 ntTSL 4 BASIC18.58■□□□□ 0.56
SNX27Q96L92 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.58■□□□□ 0.56
SNX27Q96L92 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.58■□□□□ 0.56
SNX27Q96L92 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNX27Q96L92 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SNX27Q96L92 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNX27Q96L92 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNX27Q96L92 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
SNX27Q96L92 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.58■□□□□ 0.56
SNX27Q96L92 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNX27Q96L92 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SNX27Q96L92 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.57■□□□□ 0.56
SNX27Q96L92 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.57■□□□□ 0.56
SNX27Q96L92 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.57■□□□□ 0.56
SNX27Q96L92 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNX27Q96L92 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SNX27Q96L92 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SNX27Q96L92 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.57■□□□□ 0.56
SNX27Q96L92 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNX27Q96L92 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SNX27Q96L92 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SNX27Q96L92 AC092474.2-201ENST00000424288 719 ntBASIC18.57■□□□□ 0.56
SNX27Q96L92 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.57■□□□□ 0.56
SNX27Q96L92 AC087163.2-201ENST00000457299 853 ntBASIC18.57■□□□□ 0.56
SNX27Q96L92 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNX27Q96L92 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.57■□□□□ 0.56
SNX27Q96L92 AC018845.2-201ENST00000568326 409 ntBASIC18.57■□□□□ 0.56
SNX27Q96L92 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.57■□□□□ 0.56
SNX27Q96L92 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms