Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.51■□□□□ 0.23
ITCHQ96J02 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ITCHQ96J02 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ITCHQ96J02 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ITCHQ96J02 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ITCHQ96J02 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ITCHQ96J02 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ITCHQ96J02 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ITCHQ96J02 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ITCHQ96J02 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.51■□□□□ 0.23
ITCHQ96J02 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.51■□□□□ 0.23
ITCHQ96J02 AC007967.3-201ENST00000434308 558 ntBASIC16.51■□□□□ 0.23
ITCHQ96J02 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.51■□□□□ 0.23
ITCHQ96J02 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
ITCHQ96J02 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ITCHQ96J02 RNF126P1-202ENST00000569893 925 ntBASIC16.51■□□□□ 0.23
ITCHQ96J02 AC133561.5-201ENST00000635547 218 ntBASIC16.51■□□□□ 0.23
ITCHQ96J02 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ITCHQ96J02 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
ITCHQ96J02 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ITCHQ96J02 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ITCHQ96J02 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ITCHQ96J02 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ITCHQ96J02 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ITCHQ96J02 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ITCHQ96J02 AC092053.1-201ENST00000605787 1936 ntBASIC16.51■□□□□ 0.23
ITCHQ96J02 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ITCHQ96J02 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.5■□□□□ 0.23
ITCHQ96J02 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.5■□□□□ 0.23
ITCHQ96J02 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ITCHQ96J02 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ITCHQ96J02 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
ITCHQ96J02 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ITCHQ96J02 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ITCHQ96J02 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ITCHQ96J02 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ITCHQ96J02 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ITCHQ96J02 AC079328.2-201ENST00000561241 3354 ntBASIC16.5■□□□□ 0.23
ITCHQ96J02 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.5■□□□□ 0.23
ITCHQ96J02 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ITCHQ96J02 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ITCHQ96J02 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ITCHQ96J02 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ITCHQ96J02 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ITCHQ96J02 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
ITCHQ96J02 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
ITCHQ96J02 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ITCHQ96J02 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ITCHQ96J02 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ITCHQ96J02 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ITCHQ96J02 AC073508.3-201ENST00000619697 1419 ntBASIC16.5■□□□□ 0.23
ITCHQ96J02 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ITCHQ96J02 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.5■□□□□ 0.23
ITCHQ96J02 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
ITCHQ96J02 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ITCHQ96J02 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ITCHQ96J02 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ITCHQ96J02 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.5■□□□□ 0.23
ITCHQ96J02 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ITCHQ96J02 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.5■□□□□ 0.23
ITCHQ96J02 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.5■□□□□ 0.23
ITCHQ96J02 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ITCHQ96J02 FLJ38576-201ENST00000623820 2459 ntBASIC16.5■□□□□ 0.23
ITCHQ96J02 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.49■□□□□ 0.23
ITCHQ96J02 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
ITCHQ96J02 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ITCHQ96J02 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.49■□□□□ 0.23
ITCHQ96J02 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ITCHQ96J02 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.49■□□□□ 0.23
ITCHQ96J02 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ITCHQ96J02 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ITCHQ96J02 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.49■□□□□ 0.23
ITCHQ96J02 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.49■□□□□ 0.23
ITCHQ96J02 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ITCHQ96J02 GUSBP12-201ENST00000513727 720 ntBASIC16.49■□□□□ 0.23
ITCHQ96J02 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
ITCHQ96J02 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.49■□□□□ 0.23
ITCHQ96J02 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.49■□□□□ 0.23
ITCHQ96J02 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.49■□□□□ 0.23
ITCHQ96J02 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
ITCHQ96J02 AC012306.2-201ENST00000609350 630 ntBASIC16.49■□□□□ 0.23
ITCHQ96J02 HYMAI.1-201ENST00000620949 238 ntBASIC16.49■□□□□ 0.23
ITCHQ96J02 AC097493.4-201ENST00000641197 219 ntBASIC16.49■□□□□ 0.23
ITCHQ96J02 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
ITCHQ96J02 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ITCHQ96J02 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ITCHQ96J02 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ITCHQ96J02 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ITCHQ96J02 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ITCHQ96J02 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ITCHQ96J02 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ITCHQ96J02 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ITCHQ96J02 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.49■□□□□ 0.23
ITCHQ96J02 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ITCHQ96J02 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ITCHQ96J02 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.49■□□□□ 0.23
ITCHQ96J02 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ITCHQ96J02 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.49■□□□□ 0.23
ITCHQ96J02 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ITCHQ96J02 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms