Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE4Q96A23 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE4Q96A23 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE4Q96A23 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CPNE4Q96A23 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE4Q96A23 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CPNE4Q96A23 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE4Q96A23 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE4Q96A23 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CPNE4Q96A23 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE4Q96A23 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE4Q96A23 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CPNE4Q96A23 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE4Q96A23 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE4Q96A23 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CPNE4Q96A23 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CPNE4Q96A23 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CPNE4Q96A23 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CPNE4Q96A23 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE4Q96A23 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE4Q96A23 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE4Q96A23 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE4Q96A23 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE4Q96A23 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE4Q96A23 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE4Q96A23 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE4Q96A23 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.55■□□□□ 0.08
CPNE4Q96A23 AL031284.1-201ENST00000419297 478 ntBASIC15.55■□□□□ 0.08
CPNE4Q96A23 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.55■□□□□ 0.08
CPNE4Q96A23 ACTG1P4-201ENST00000425123 1122 ntBASIC15.55■□□□□ 0.08
CPNE4Q96A23 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.55■□□□□ 0.08
CPNE4Q96A23 RPS2P1-201ENST00000434010 821 ntBASIC15.55■□□□□ 0.08
CPNE4Q96A23 FDX1P1-201ENST00000449115 551 ntBASIC15.55■□□□□ 0.08
CPNE4Q96A23 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE4Q96A23 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.55■□□□□ 0.08
CPNE4Q96A23 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.55■□□□□ 0.08
CPNE4Q96A23 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.55■□□□□ 0.08
CPNE4Q96A23 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CPNE4Q96A23 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.55■□□□□ 0.08
CPNE4Q96A23 AC006557.2-201ENST00000592985 1240 ntBASIC15.55■□□□□ 0.08
CPNE4Q96A23 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.55■□□□□ 0.08
CPNE4Q96A23 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.55■□□□□ 0.08
CPNE4Q96A23 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE4Q96A23 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE4Q96A23 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE4Q96A23 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE4Q96A23 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE4Q96A23 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.55■□□□□ 0.08
CPNE4Q96A23 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE4Q96A23 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
CPNE4Q96A23 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE4Q96A23 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CPNE4Q96A23 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE4Q96A23 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
CPNE4Q96A23 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE4Q96A23 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE4Q96A23 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CPNE4Q96A23 AC097637.2-201ENST00000624096 1997 ntBASIC15.55■□□□□ 0.08
CPNE4Q96A23 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE4Q96A23 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE4Q96A23 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE4Q96A23 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE4Q96A23 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.54■□□□□ 0.08
CPNE4Q96A23 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.54■□□□□ 0.08
CPNE4Q96A23 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE4Q96A23 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE4Q96A23 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CPNE4Q96A23 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.54■□□□□ 0.08
CPNE4Q96A23 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE4Q96A23 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE4Q96A23 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE4Q96A23 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE4Q96A23 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE4Q96A23 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE4Q96A23 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.54■□□□□ 0.08
CPNE4Q96A23 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.54■□□□□ 0.08
CPNE4Q96A23 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE4Q96A23 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE4Q96A23 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.54■□□□□ 0.08
CPNE4Q96A23 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE4Q96A23 AC141586.5-201ENST00000624546 2050 ntBASIC15.54■□□□□ 0.08
CPNE4Q96A23 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE4Q96A23 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE4Q96A23 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE4Q96A23 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE4Q96A23 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE4Q96A23 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE4Q96A23 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE4Q96A23 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
CPNE4Q96A23 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE4Q96A23 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE4Q96A23 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE4Q96A23 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
CPNE4Q96A23 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE4Q96A23 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE4Q96A23 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
CPNE4Q96A23 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE4Q96A23 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE4Q96A23 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE4Q96A23 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms