Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF34Q969K3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF34Q969K3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF34Q969K3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF34Q969K3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF34Q969K3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
RNF34Q969K3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
RNF34Q969K3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RNF34Q969K3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF34Q969K3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RNF34Q969K3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF34Q969K3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF34Q969K3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF34Q969K3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF34Q969K3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF34Q969K3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF34Q969K3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF34Q969K3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RNF34Q969K3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF34Q969K3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF34Q969K3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RNF34Q969K3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF34Q969K3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF34Q969K3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF34Q969K3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RNF34Q969K3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF34Q969K3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF34Q969K3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF34Q969K3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF34Q969K3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF34Q969K3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
RNF34Q969K3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF34Q969K3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF34Q969K3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RNF34Q969K3 AF186996.4-201ENST00000467186 377 ntBASIC18.11■□□□□ 0.49
RNF34Q969K3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RNF34Q969K3 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF34Q969K3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF34Q969K3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.11■□□□□ 0.49
RNF34Q969K3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.11■□□□□ 0.49
RNF34Q969K3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RNF34Q969K3 MTDHP4-201ENST00000600287 670 ntBASIC18.11■□□□□ 0.49
RNF34Q969K3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF34Q969K3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF34Q969K3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RNF34Q969K3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF34Q969K3 SIGLEC16-201ENST00000599858 1437 ntBASIC18.11■□□□□ 0.49
RNF34Q969K3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF34Q969K3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF34Q969K3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF34Q969K3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF34Q969K3 AL138688.1-201ENST00000624851 1594 ntBASIC18.11■□□□□ 0.49
RNF34Q969K3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
RNF34Q969K3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF34Q969K3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF34Q969K3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF34Q969K3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF34Q969K3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
RNF34Q969K3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF34Q969K3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF34Q969K3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RNF34Q969K3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF34Q969K3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF34Q969K3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
RNF34Q969K3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF34Q969K3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF34Q969K3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RNF34Q969K3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF34Q969K3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF34Q969K3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF34Q969K3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF34Q969K3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF34Q969K3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF34Q969K3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF34Q969K3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
RNF34Q969K3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF34Q969K3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RNF34Q969K3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RNF34Q969K3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF34Q969K3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF34Q969K3 AL160237.2-201ENST00000556165 472 ntBASIC18.1■□□□□ 0.49
RNF34Q969K3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.1■□□□□ 0.49
RNF34Q969K3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF34Q969K3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF34Q969K3 AC073592.4-201ENST00000623827 446 ntBASIC18.1■□□□□ 0.49
RNF34Q969K3 TP73-AS1-207ENST00000624167 988 ntBASIC18.1■□□□□ 0.49
RNF34Q969K3 AC106820.2-201ENST00000563775 3264 ntBASIC18.1■□□□□ 0.49
RNF34Q969K3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF34Q969K3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF34Q969K3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF34Q969K3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF34Q969K3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF34Q969K3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF34Q969K3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF34Q969K3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF34Q969K3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF34Q969K3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF34Q969K3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RNF34Q969K3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF34Q969K3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms