Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCG3Q8WXD2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SCG3Q8WXD2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.77■□□□□ 0.44
SCG3Q8WXD2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCG3Q8WXD2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCG3Q8WXD2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCG3Q8WXD2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.77■□□□□ 0.44
SCG3Q8WXD2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.77■□□□□ 0.44
SCG3Q8WXD2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCG3Q8WXD2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCG3Q8WXD2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCG3Q8WXD2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCG3Q8WXD2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCG3Q8WXD2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCG3Q8WXD2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCG3Q8WXD2 NUS1P2-201ENST00000417358 873 ntBASIC17.77■□□□□ 0.44
SCG3Q8WXD2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.77■□□□□ 0.44
SCG3Q8WXD2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCG3Q8WXD2 AL160237.2-201ENST00000556165 472 ntBASIC17.77■□□□□ 0.44
SCG3Q8WXD2 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.77■□□□□ 0.44
SCG3Q8WXD2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SCG3Q8WXD2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.77■□□□□ 0.44
SCG3Q8WXD2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.77■□□□□ 0.44
SCG3Q8WXD2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.77■□□□□ 0.44
SCG3Q8WXD2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCG3Q8WXD2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCG3Q8WXD2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCG3Q8WXD2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.77■□□□□ 0.43
SCG3Q8WXD2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
SCG3Q8WXD2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCG3Q8WXD2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.77■□□□□ 0.43
SCG3Q8WXD2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
SCG3Q8WXD2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCG3Q8WXD2 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 AL355312.1-201ENST00000407115 2176 ntBASIC17.76■□□□□ 0.43
SCG3Q8WXD2 AL138688.1-201ENST00000624851 1594 ntBASIC17.76■□□□□ 0.43
SCG3Q8WXD2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 KRT8P47-201ENST00000604727 1398 ntBASIC17.76■□□□□ 0.43
SCG3Q8WXD2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
SCG3Q8WXD2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.75■□□□□ 0.43
SCG3Q8WXD2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.75■□□□□ 0.43
SCG3Q8WXD2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCG3Q8WXD2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SCG3Q8WXD2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCG3Q8WXD2 UBALD1-205ENST00000590891 2641 ntBASIC17.75■□□□□ 0.43
SCG3Q8WXD2 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
SCG3Q8WXD2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCG3Q8WXD2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.75■□□□□ 0.43
SCG3Q8WXD2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCG3Q8WXD2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCG3Q8WXD2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SCG3Q8WXD2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCG3Q8WXD2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCG3Q8WXD2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.75■□□□□ 0.43
SCG3Q8WXD2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.75■□□□□ 0.43
SCG3Q8WXD2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCG3Q8WXD2 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SCG3Q8WXD2 AL031008.1-201ENST00000619963 541 ntBASIC17.75■□□□□ 0.43
SCG3Q8WXD2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCG3Q8WXD2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCG3Q8WXD2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCG3Q8WXD2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.75■□□□□ 0.43
SCG3Q8WXD2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCG3Q8WXD2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCG3Q8WXD2 HLA-J-201ENST00000462773 1622 ntBASIC17.75■□□□□ 0.43
SCG3Q8WXD2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms