Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
U2AF1L4Q8WU68 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
U2AF1L4Q8WU68 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
U2AF1L4Q8WU68 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
U2AF1L4Q8WU68 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
U2AF1L4Q8WU68 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2AF1L4Q8WU68 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.76■□□□□ 0.75
U2AF1L4Q8WU68 INGX-202ENST00000489074 768 ntBASIC19.76■□□□□ 0.75
U2AF1L4Q8WU68 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.76■□□□□ 0.75
U2AF1L4Q8WU68 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
U2AF1L4Q8WU68 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
U2AF1L4Q8WU68 AC087641.1-201ENST00000557561 1021 ntBASIC19.76■□□□□ 0.75
U2AF1L4Q8WU68 AC023141.13-201ENST00000604991 943 ntBASIC19.76■□□□□ 0.75
U2AF1L4Q8WU68 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
U2AF1L4Q8WU68 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2AF1L4Q8WU68 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2AF1L4Q8WU68 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2AF1L4Q8WU68 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2AF1L4Q8WU68 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.76■□□□□ 0.75
U2AF1L4Q8WU68 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2AF1L4Q8WU68 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.76■□□□□ 0.75
U2AF1L4Q8WU68 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
U2AF1L4Q8WU68 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.76■□□□□ 0.75
U2AF1L4Q8WU68 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 AC067852.2-201ENST00000590513 2313 ntBASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 DUX4L27-201ENST00000554796 1261 ntBASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 OR7E47P-204ENST00000575924 449 ntBASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 REXO1L3P-201ENST00000622202 1288 ntBASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 AL121761.2-201ENST00000598007 1648 ntBASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
U2AF1L4Q8WU68 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 AC015911.4-201ENST00000588022 1070 ntBASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
U2AF1L4Q8WU68 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
U2AF1L4Q8WU68 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
U2AF1L4Q8WU68 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
U2AF1L4Q8WU68 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
U2AF1L4Q8WU68 AL353593.2-201ENST00000602529 1483 ntBASIC19.73■□□□□ 0.75
U2AF1L4Q8WU68 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
U2AF1L4Q8WU68 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
U2AF1L4Q8WU68 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.73■□□□□ 0.75
U2AF1L4Q8WU68 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.73■□□□□ 0.75
U2AF1L4Q8WU68 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms