Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 ELK1P1-201ENST00000485699 580 ntBASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 PARP8-206ENST00000503665 572 ntTSL 4 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC11.48□□□□□ -0.57
ALMS1Q8TCU4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 AC116562.4-201ENST00000641316 2276 ntBASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 GRAMD4P3-201ENST00000621665 1669 ntBASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 AL391825.1-201ENST00000457671 1364 ntBASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 AC234783.1-201ENST00000441761 496 ntBASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 REXO1L6P-201ENST00000603433 1515 ntBASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ALMS1Q8TCU4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ALMS1Q8TCU4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ALMS1Q8TCU4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
ALMS1Q8TCU4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
ALMS1Q8TCU4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ALMS1Q8TCU4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC11.46□□□□□ -0.57
ALMS1Q8TCU4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC11.46□□□□□ -0.57
ALMS1Q8TCU4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.57
ALMS1Q8TCU4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ALMS1Q8TCU4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
ALMS1Q8TCU4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC11.46□□□□□ -0.57
ALMS1Q8TCU4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
ALMS1Q8TCU4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ALMS1Q8TCU4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC11.46□□□□□ -0.57
ALMS1Q8TCU4 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC11.46□□□□□ -0.57
ALMS1Q8TCU4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.46□□□□□ -0.57
ALMS1Q8TCU4 AC022210.1-201ENST00000449856 793 ntBASIC11.46□□□□□ -0.57
ALMS1Q8TCU4 AC135586.1-201ENST00000539323 574 ntBASIC11.46□□□□□ -0.57
ALMS1Q8TCU4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ALMS1Q8TCU4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ALMS1Q8TCU4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ALMS1Q8TCU4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ALMS1Q8TCU4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ALMS1Q8TCU4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms