Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SHKBP1Q8TBC3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SHKBP1Q8TBC3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SHKBP1Q8TBC3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 FLJ13224-201ENST00000313737 1514 ntBASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 AP006288.1-201ENST00000446065 395 ntBASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 YBX1P5-201ENST00000509441 847 ntBASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 OR7E47P-204ENST00000575924 449 ntBASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SHKBP1Q8TBC3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 MIR4469-201ENST00000583919 79 ntBASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 AC010507.1-201ENST00000633895 436 ntBASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.13■□□□□ 0.49
SHKBP1Q8TBC3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 TNRC18P3-201ENST00000441896 2691 ntBASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 AL078644.1-201ENST00000609881 752 ntBASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 AL596442.2-201ENST00000610240 980 ntBASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 C20orf181-201ENST00000623918 480 ntBASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 AC138932.1-201ENST00000534164 6830 ntBASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
SHKBP1Q8TBC3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms