Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LSMEM1Q8N8F7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 TOB2P1-201ENST00000469761 992 ntBASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 STK19B-204ENST00000512515 211 ntBASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 AC132938.5-201ENST00000624980 1813 ntBASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LSMEM1Q8N8F7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 NSUN5P1-202ENST00000421140 1535 ntBASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 NSUN5P2-203ENST00000457352 1529 ntBASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 MINOS1P3-201ENST00000457048 203 ntBASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 BNIP3P18-201ENST00000593976 575 ntBASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 PCDH8P1-201ENST00000428983 2773 ntBASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
LSMEM1Q8N8F7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LSMEM1Q8N8F7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms