Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATPAF2Q8N5M1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 FGFR3P6-201ENST00000457012 610 ntBASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 UNC93B7-201ENST00000509439 705 ntBASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 AC004817.3-201ENST00000602957 2129 ntBASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATPAF2Q8N5M1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 LTB4R2-202ENST00000528054 3092 ntBASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 SLC25A1P3-201ENST00000395415 828 ntBASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 SCARNA2-201ENST00000458748 420 ntBASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 NKAPP1-205ENST00000585790 367 ntBASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 AL022326.1-202ENST00000641533 845 ntBASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 AC097637.2-201ENST00000624096 1997 ntBASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATPAF2Q8N5M1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 AF238378.1-201ENST00000526806 358 ntBASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.72■□□□□ 0.43
ATPAF2Q8N5M1 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms