Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PROM2Q8N271 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PROM2Q8N271 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PROM2Q8N271 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC21.81■■□□□ 1.08
PROM2Q8N271 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PROM2Q8N271 AL512384.1-201ENST00000406683 331 ntBASIC21.81■■□□□ 1.08
PROM2Q8N271 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC21.81■■□□□ 1.08
PROM2Q8N271 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC21.81■■□□□ 1.08
PROM2Q8N271 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
PROM2Q8N271 HLA-V-204ENST00000476601 1289 ntBASIC21.81■■□□□ 1.08
PROM2Q8N271 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC21.81■■□□□ 1.08
PROM2Q8N271 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC21.81■■□□□ 1.08
PROM2Q8N271 KRT17P8-201ENST00000540749 863 ntBASIC21.81■■□□□ 1.08
PROM2Q8N271 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PROM2Q8N271 AC106886.1-201ENST00000568660 600 ntBASIC21.81■■□□□ 1.08
PROM2Q8N271 AC005412.3-201ENST00000580309 715 ntBASIC21.81■■□□□ 1.08
PROM2Q8N271 AL844908.2-201ENST00000609461 460 ntBASIC21.81■■□□□ 1.08
PROM2Q8N271 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC21.81■■□□□ 1.08
PROM2Q8N271 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC21.81■■□□□ 1.08
PROM2Q8N271 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PROM2Q8N271 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PROM2Q8N271 HNRNPRP1-201ENST00000453465 1695 ntBASIC21.81■■□□□ 1.08
PROM2Q8N271 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.81■■□□□ 1.08
PROM2Q8N271 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC21.81■■□□□ 1.08
PROM2Q8N271 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PROM2Q8N271 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.8■■□□□ 1.08
PROM2Q8N271 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PROM2Q8N271 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
PROM2Q8N271 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PROM2Q8N271 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PROM2Q8N271 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PROM2Q8N271 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PROM2Q8N271 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC21.8■■□□□ 1.08
PROM2Q8N271 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC21.8■■□□□ 1.08
PROM2Q8N271 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PROM2Q8N271 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC21.8■■□□□ 1.08
PROM2Q8N271 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
PROM2Q8N271 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC21.8■■□□□ 1.08
PROM2Q8N271 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PROM2Q8N271 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.8■■□□□ 1.08
PROM2Q8N271 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PROM2Q8N271 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PROM2Q8N271 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.8■■□□□ 1.08
PROM2Q8N271 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PROM2Q8N271 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PROM2Q8N271 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PROM2Q8N271 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PROM2Q8N271 AP3S2-216ENST00000617003 1561 ntBASIC21.79■■□□□ 1.08
PROM2Q8N271 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.79■■□□□ 1.08
PROM2Q8N271 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PROM2Q8N271 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PROM2Q8N271 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.79■■□□□ 1.08
PROM2Q8N271 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PROM2Q8N271 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PROM2Q8N271 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
PROM2Q8N271 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PROM2Q8N271 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC21.79■■□□□ 1.08
PROM2Q8N271 GNAQP1-201ENST00000444815 1067 ntBASIC21.79■■□□□ 1.08
PROM2Q8N271 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC21.79■■□□□ 1.08
PROM2Q8N271 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PROM2Q8N271 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC21.79■■□□□ 1.08
PROM2Q8N271 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PROM2Q8N271 RARRES2P9-201ENST00000565168 469 ntBASIC21.79■■□□□ 1.08
PROM2Q8N271 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PROM2Q8N271 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC21.79■■□□□ 1.08
PROM2Q8N271 AC007967.4-201ENST00000614700 386 ntBASIC21.79■■□□□ 1.08
PROM2Q8N271 AL033527.4-201ENST00000641026 673 ntBASIC21.79■■□□□ 1.08
PROM2Q8N271 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PROM2Q8N271 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PROM2Q8N271 AL020996.1-203ENST00000536896 2307 ntBASIC21.79■■□□□ 1.08
PROM2Q8N271 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.79■■□□□ 1.08
PROM2Q8N271 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PROM2Q8N271 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
PROM2Q8N271 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PROM2Q8N271 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC21.79■■□□□ 1.08
PROM2Q8N271 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PROM2Q8N271 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PROM2Q8N271 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC21.78■■□□□ 1.08
PROM2Q8N271 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC21.78■■□□□ 1.08
PROM2Q8N271 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC21.78■■□□□ 1.08
PROM2Q8N271 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PROM2Q8N271 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC21.78■■□□□ 1.08
PROM2Q8N271 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PROM2Q8N271 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC21.78■■□□□ 1.08
PROM2Q8N271 AC142381.1-201ENST00000426099 345 ntBASIC21.78■■□□□ 1.08
PROM2Q8N271 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC21.78■■□□□ 1.08
PROM2Q8N271 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC21.78■■□□□ 1.08
PROM2Q8N271 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC21.78■■□□□ 1.08
PROM2Q8N271 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PROM2Q8N271 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PROM2Q8N271 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC21.78■■□□□ 1.08
PROM2Q8N271 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PROM2Q8N271 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PROM2Q8N271 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
PROM2Q8N271 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC21.78■■□□□ 1.08
PROM2Q8N271 PRR29-204ENST00000577953 565 ntTSL 4 BASIC21.78■■□□□ 1.08
PROM2Q8N271 AC060766.1-201ENST00000590824 627 ntBASIC21.78■■□□□ 1.08
PROM2Q8N271 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC21.78■■□□□ 1.08
PROM2Q8N271 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PROM2Q8N271 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms