Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEFF1Q8IYR6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 AC002056.1-201ENST00000395613 760 ntBASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 AC026120.1-201ENST00000611536 926 ntBASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 AL135999.2-201ENST00000622438 1686 ntBASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 HTR7P1-202ENST00000624664 4411 ntBASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEFF1Q8IYR6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 AL627223.1-201ENST00000416693 442 ntBASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 AL671277.1-201ENST00000429656 993 ntBASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 ADH5P3-201ENST00000433842 1137 ntBASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 AC005237.2-201ENST00000434368 219 ntBASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 AC069262.1-201ENST00000539058 672 ntBASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 DUX4L27-201ENST00000554796 1261 ntBASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 Z92544.3-201ENST00000624747 417 ntBASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 AC135050.7-201ENST00000624508 2218 ntBASIC17.11■□□□□ 0.33
TMEFF1Q8IYR6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms