Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SLX4Q8IY92 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.8■□□□□ 0.92
SLX4Q8IY92 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.8■□□□□ 0.92
SLX4Q8IY92 AL359881.2-201ENST00000602973 570 ntBASIC20.8■□□□□ 0.92
SLX4Q8IY92 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLX4Q8IY92 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SLX4Q8IY92 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC20.8■□□□□ 0.92
SLX4Q8IY92 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLX4Q8IY92 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.79■□□□□ 0.92
SLX4Q8IY92 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLX4Q8IY92 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLX4Q8IY92 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLX4Q8IY92 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLX4Q8IY92 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLX4Q8IY92 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SLX4Q8IY92 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLX4Q8IY92 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.79■□□□□ 0.92
SLX4Q8IY92 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.79■□□□□ 0.92
SLX4Q8IY92 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20.79■□□□□ 0.92
SLX4Q8IY92 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.79■□□□□ 0.92
SLX4Q8IY92 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.79■□□□□ 0.92
SLX4Q8IY92 AP3S2-216ENST00000617003 1561 ntBASIC20.79■□□□□ 0.92
SLX4Q8IY92 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.79■□□□□ 0.92
SLX4Q8IY92 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLX4Q8IY92 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLX4Q8IY92 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLX4Q8IY92 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SLX4Q8IY92 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SLX4Q8IY92 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLX4Q8IY92 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLX4Q8IY92 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLX4Q8IY92 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLX4Q8IY92 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.78■□□□□ 0.92
SLX4Q8IY92 ATP5G2P4-201ENST00000442175 420 ntBASIC20.78■□□□□ 0.92
SLX4Q8IY92 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.78■□□□□ 0.92
SLX4Q8IY92 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.78■□□□□ 0.92
SLX4Q8IY92 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.78■□□□□ 0.92
SLX4Q8IY92 AL132655.2-201ENST00000596276 594 ntBASIC20.78■□□□□ 0.92
SLX4Q8IY92 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
SLX4Q8IY92 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLX4Q8IY92 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SLX4Q8IY92 AC138028.4-201ENST00000564984 1845 ntBASIC20.78■□□□□ 0.92
SLX4Q8IY92 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLX4Q8IY92 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SLX4Q8IY92 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLX4Q8IY92 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC20.78■□□□□ 0.92
SLX4Q8IY92 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SLX4Q8IY92 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.78■□□□□ 0.92
SLX4Q8IY92 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLX4Q8IY92 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.78■□□□□ 0.92
SLX4Q8IY92 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.78■□□□□ 0.92
SLX4Q8IY92 AC009477.1-201ENST00000452936 217 ntBASIC20.78■□□□□ 0.92
SLX4Q8IY92 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC20.78■□□□□ 0.92
SLX4Q8IY92 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC20.78■□□□□ 0.92
SLX4Q8IY92 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.78■□□□□ 0.92
SLX4Q8IY92 REEP4-207ENST00000523293 913 ntTSL 3 BASIC20.78■□□□□ 0.92
SLX4Q8IY92 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC20.78■□□□□ 0.92
SLX4Q8IY92 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.78■□□□□ 0.92
SLX4Q8IY92 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.78■□□□□ 0.92
SLX4Q8IY92 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.78■□□□□ 0.92
SLX4Q8IY92 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLX4Q8IY92 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.77■□□□□ 0.92
SLX4Q8IY92 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLX4Q8IY92 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLX4Q8IY92 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.77■□□□□ 0.92
SLX4Q8IY92 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLX4Q8IY92 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.77■□□□□ 0.92
SLX4Q8IY92 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.77■□□□□ 0.92
SLX4Q8IY92 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLX4Q8IY92 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.77■□□□□ 0.92
SLX4Q8IY92 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLX4Q8IY92 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
SLX4Q8IY92 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLX4Q8IY92 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.77■□□□□ 0.92
SLX4Q8IY92 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.77■□□□□ 0.92
SLX4Q8IY92 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.77■□□□□ 0.92
SLX4Q8IY92 AC007967.4-201ENST00000614700 386 ntBASIC20.77■□□□□ 0.92
SLX4Q8IY92 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.77■□□□□ 0.92
SLX4Q8IY92 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLX4Q8IY92 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SLX4Q8IY92 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLX4Q8IY92 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLX4Q8IY92 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
SLX4Q8IY92 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.77■□□□□ 0.91
SLX4Q8IY92 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.77■□□□□ 0.91
SLX4Q8IY92 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.77■□□□□ 0.91
SLX4Q8IY92 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLX4Q8IY92 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
SLX4Q8IY92 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.77■□□□□ 0.91
SLX4Q8IY92 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLX4Q8IY92 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLX4Q8IY92 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLX4Q8IY92 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLX4Q8IY92 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SLX4Q8IY92 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.76■□□□□ 0.91
SLX4Q8IY92 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.76■□□□□ 0.91
SLX4Q8IY92 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC20.76■□□□□ 0.91
SLX4Q8IY92 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC20.76■□□□□ 0.91
SLX4Q8IY92 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.76■□□□□ 0.91
SLX4Q8IY92 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms