Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 AL121912.1-201ENST00000603683 238 ntBASIC16.25■□□□□ 0.19
CCDC71Q8IV32 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 DOC2GP-204ENST00000639052 2548 ntBASIC16.25■□□□□ 0.19
CCDC71Q8IV32 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC71Q8IV32 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 MRPL3P1-201ENST00000400109 1033 ntBASIC16.24■□□□□ 0.19
CCDC71Q8IV32 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 MINOS1P3-201ENST00000457048 203 ntBASIC16.24■□□□□ 0.19
CCDC71Q8IV32 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 SLC25A6P4-201ENST00000586535 553 ntBASIC16.24■□□□□ 0.19
CCDC71Q8IV32 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCDC71Q8IV32 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 AKR1C7P-201ENST00000305623 895 ntBASIC16.23■□□□□ 0.19
CCDC71Q8IV32 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 AC011840.4-201ENST00000578471 627 ntBASIC16.23■□□□□ 0.19
CCDC71Q8IV32 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 LINC01451-201ENST00000623792 534 ntBASIC16.23■□□□□ 0.19
CCDC71Q8IV32 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC71Q8IV32 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms