Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 AL355312.1-201ENST00000407115 2176 ntBASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 CU639417.3-201ENST00000624240 1404 ntBASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 FAM86C2P-203ENST00000528684 1004 ntBASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 CD7-202ENST00000578509 925 ntTSL 3 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 AC022144.1-201ENST00000602255 1580 ntBASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 AC140878.1-201ENST00000565277 250 ntBASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 RARRES2P8-201ENST00000566335 367 ntBASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 IFT20-216ENST00000588477 774 ntTSL 5 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 AC026150.2-201ENST00000564693 1156 ntBASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
VPS13BQ7Z7G8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 MIR4525-201ENST00000580000 75 ntBASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 ABALON-201ENST00000629058 1903 ntBASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 DGCR5-201ENST00000399539 862 ntBASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VPS13BQ7Z7G8 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms