Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 MIR943-201ENST00000401286 94 ntBASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 SPCS2P4-201ENST00000436160 681 ntBASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 LINC01225-203ENST00000563550 1244 ntBASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 AL161645.1-201ENST00000622716 1255 ntBASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 BX323043.1-201ENST00000641006 1765 ntBASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDCP2Q5VXM1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 HMGA1P7-201ENST00000406908 502 ntBASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 AC084121.4-201ENST00000641598 221 ntBASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 AF228730.8-201ENST00000642140 221 ntBASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDCP2Q5VXM1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 AC236430.1-201ENST00000402231 743 ntBASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 RBPMS2P1-201ENST00000437762 623 ntBASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 AC002472.2-201ENST00000442739 958 ntBASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 AC087641.1-201ENST00000557561 1021 ntBASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 KRT8P23-201ENST00000560090 1207 ntBASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.31■□□□□ 0.2
CDCP2Q5VXM1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP2Q5VXM1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDCP2Q5VXM1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
CDCP2Q5VXM1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CDCP2Q5VXM1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms