Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRK2Q5S007 AC092506.1-202ENST00000401022 528 ntBASIC14.83□□□□□ -0.04
LRRK2Q5S007 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.83□□□□□ -0.04
LRRK2Q5S007 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC14.83□□□□□ -0.04
LRRK2Q5S007 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.83□□□□□ -0.04
LRRK2Q5S007 AC027307.2-201ENST00000591252 911 ntBASIC14.83□□□□□ -0.04
LRRK2Q5S007 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.83□□□□□ -0.04
LRRK2Q5S007 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.83□□□□□ -0.04
LRRK2Q5S007 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRK2Q5S007 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRK2Q5S007 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRK2Q5S007 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRRK2Q5S007 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRRK2Q5S007 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LRRK2Q5S007 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LRRK2Q5S007 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LRRK2Q5S007 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.83□□□□□ -0.04
LRRK2Q5S007 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRK2Q5S007 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRRK2Q5S007 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRRK2Q5S007 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.83□□□□□ -0.04
LRRK2Q5S007 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LRRK2Q5S007 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
LRRK2Q5S007 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRK2Q5S007 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRRK2Q5S007 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.83□□□□□ -0.04
LRRK2Q5S007 GNAQP1-201ENST00000444815 1067 ntBASIC14.83□□□□□ -0.04
LRRK2Q5S007 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
LRRK2Q5S007 STK19B-204ENST00000512515 211 ntBASIC14.83□□□□□ -0.04
LRRK2Q5S007 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LRRK2Q5S007 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LRRK2Q5S007 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRRK2Q5S007 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRK2Q5S007 TUBB1P2-201ENST00000422712 1306 ntBASIC14.82□□□□□ -0.04
LRRK2Q5S007 TUBB1P1-201ENST00000503144 1300 ntBASIC14.82□□□□□ -0.04
LRRK2Q5S007 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LRRK2Q5S007 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRK2Q5S007 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRK2Q5S007 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.82□□□□□ -0.04
LRRK2Q5S007 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LRRK2Q5S007 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRRK2Q5S007 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRK2Q5S007 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRK2Q5S007 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.82□□□□□ -0.04
LRRK2Q5S007 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRK2Q5S007 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.82□□□□□ -0.04
LRRK2Q5S007 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRK2Q5S007 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.82□□□□□ -0.04
LRRK2Q5S007 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRRK2Q5S007 AL583810.1-201ENST00000553344 1045 ntBASIC14.82□□□□□ -0.04
LRRK2Q5S007 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC14.82□□□□□ -0.04
LRRK2Q5S007 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LRRK2Q5S007 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRK2Q5S007 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRK2Q5S007 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRRK2Q5S007 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.82□□□□□ -0.04
LRRK2Q5S007 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRK2Q5S007 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRK2Q5S007 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRRK2Q5S007 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRK2Q5S007 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRK2Q5S007 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LRRK2Q5S007 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.82□□□□□ -0.04
LRRK2Q5S007 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.82□□□□□ -0.04
LRRK2Q5S007 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.82□□□□□ -0.04
LRRK2Q5S007 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRK2Q5S007 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRK2Q5S007 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRK2Q5S007 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.81□□□□□ -0.04
LRRK2Q5S007 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRK2Q5S007 AC016027.1-202ENST00000607927 1699 ntBASIC14.81□□□□□ -0.04
LRRK2Q5S007 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.81□□□□□ -0.04
LRRK2Q5S007 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.81□□□□□ -0.04
LRRK2Q5S007 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LRRK2Q5S007 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRK2Q5S007 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRK2Q5S007 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRK2Q5S007 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRK2Q5S007 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.81□□□□□ -0.04
LRRK2Q5S007 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.81□□□□□ -0.04
LRRK2Q5S007 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.81□□□□□ -0.04
LRRK2Q5S007 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.81□□□□□ -0.04
LRRK2Q5S007 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.81□□□□□ -0.04
LRRK2Q5S007 AC005412.3-201ENST00000580309 715 ntBASIC14.81□□□□□ -0.04
LRRK2Q5S007 AL844908.2-201ENST00000609461 460 ntBASIC14.81□□□□□ -0.04
LRRK2Q5S007 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.81□□□□□ -0.04
LRRK2Q5S007 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
LRRK2Q5S007 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRK2Q5S007 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRK2Q5S007 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRK2Q5S007 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRK2Q5S007 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRK2Q5S007 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRK2Q5S007 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.81□□□□□ -0.04
LRRK2Q5S007 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.81□□□□□ -0.04
LRRK2Q5S007 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.81□□□□□ -0.04
LRRK2Q5S007 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.81□□□□□ -0.04
LRRK2Q5S007 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.81□□□□□ -0.04
LRRK2Q5S007 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.81□□□□□ -0.04
LRRK2Q5S007 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms