Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.64■□□□□ 0.25
RSPO4Q2I0M5 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 HCG4-201ENST00000418983 998 ntBASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 SLC25A6P2-201ENST00000497974 877 ntBASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 GMCL1P1-201ENST00000463439 1581 ntBASIC16.63■□□□□ 0.25
RSPO4Q2I0M5 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RSPO4Q2I0M5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms