Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KCNA1Q09470 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KCNA1Q09470 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
KCNA1Q09470 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
KCNA1Q09470 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
KCNA1Q09470 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19■□□□□ 0.63
KCNA1Q09470 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KCNA1Q09470 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KCNA1Q09470 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
KCNA1Q09470 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KCNA1Q09470 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KCNA1Q09470 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19■□□□□ 0.63
KCNA1Q09470 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19■□□□□ 0.63
KCNA1Q09470 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19■□□□□ 0.63
KCNA1Q09470 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19■□□□□ 0.63
KCNA1Q09470 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KCNA1Q09470 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.99■□□□□ 0.63
KCNA1Q09470 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNA1Q09470 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KCNA1Q09470 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
KCNA1Q09470 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNA1Q09470 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNA1Q09470 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
KCNA1Q09470 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNA1Q09470 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
KCNA1Q09470 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KCNA1Q09470 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.99■□□□□ 0.63
KCNA1Q09470 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.99■□□□□ 0.63
KCNA1Q09470 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
KCNA1Q09470 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KCNA1Q09470 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.99■□□□□ 0.63
KCNA1Q09470 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.99■□□□□ 0.63
KCNA1Q09470 FAM197Y8-203ENST00000450145 560 ntBASIC18.99■□□□□ 0.63
KCNA1Q09470 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.99■□□□□ 0.63
KCNA1Q09470 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
KCNA1Q09470 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.99■□□□□ 0.63
KCNA1Q09470 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
KCNA1Q09470 RNPS1P1-201ENST00000507437 918 ntBASIC18.99■□□□□ 0.63
KCNA1Q09470 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.99■□□□□ 0.63
KCNA1Q09470 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
KCNA1Q09470 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.99■□□□□ 0.63
KCNA1Q09470 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.99■□□□□ 0.63
KCNA1Q09470 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.99■□□□□ 0.63
KCNA1Q09470 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.99■□□□□ 0.63
KCNA1Q09470 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNA1Q09470 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KCNA1Q09470 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
KCNA1Q09470 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNA1Q09470 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.99■□□□□ 0.63
KCNA1Q09470 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.99■□□□□ 0.63
KCNA1Q09470 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.99■□□□□ 0.63
KCNA1Q09470 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNA1Q09470 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KCNA1Q09470 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
KCNA1Q09470 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNA1Q09470 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
KCNA1Q09470 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNA1Q09470 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.98■□□□□ 0.63
KCNA1Q09470 RPS2P1-201ENST00000434010 821 ntBASIC18.98■□□□□ 0.63
KCNA1Q09470 SCARNA2-201ENST00000458748 420 ntBASIC18.98■□□□□ 0.63
KCNA1Q09470 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.98■□□□□ 0.63
KCNA1Q09470 AP002469.2-201ENST00000531724 424 ntBASIC18.98■□□□□ 0.63
KCNA1Q09470 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.98■□□□□ 0.63
KCNA1Q09470 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.98■□□□□ 0.63
KCNA1Q09470 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.98■□□□□ 0.63
KCNA1Q09470 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KCNA1Q09470 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.98■□□□□ 0.63
KCNA1Q09470 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNA1Q09470 PCDHA12-202ENST00000613593 2588 ntBASIC18.98■□□□□ 0.63
KCNA1Q09470 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNA1Q09470 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
KCNA1Q09470 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNA1Q09470 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNA1Q09470 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNA1Q09470 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNA1Q09470 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.98■□□□□ 0.63
KCNA1Q09470 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KCNA1Q09470 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNA1Q09470 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.98■□□□□ 0.63
KCNA1Q09470 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KCNA1Q09470 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
KCNA1Q09470 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.98■□□□□ 0.63
KCNA1Q09470 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
KCNA1Q09470 LINC02012-201ENST00000608206 1725 ntBASIC18.97■□□□□ 0.63
KCNA1Q09470 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KCNA1Q09470 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
KCNA1Q09470 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KCNA1Q09470 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KCNA1Q09470 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KCNA1Q09470 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KCNA1Q09470 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KCNA1Q09470 MRPL3P1-201ENST00000400109 1033 ntBASIC18.97■□□□□ 0.63
KCNA1Q09470 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KCNA1Q09470 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.97■□□□□ 0.63
KCNA1Q09470 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KCNA1Q09470 ACTG1P4-201ENST00000425123 1122 ntBASIC18.97■□□□□ 0.63
KCNA1Q09470 AC018712.1-201ENST00000455767 687 ntBASIC18.97■□□□□ 0.63
KCNA1Q09470 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.97■□□□□ 0.63
KCNA1Q09470 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.97■□□□□ 0.63
KCNA1Q09470 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms