Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBXN1Q04323 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.98■□□□□ 0.63
UBXN1Q04323 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBXN1Q04323 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.97■□□□□ 0.63
UBXN1Q04323 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.97■□□□□ 0.63
UBXN1Q04323 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBXN1Q04323 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBXN1Q04323 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBXN1Q04323 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBXN1Q04323 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.97■□□□□ 0.63
UBXN1Q04323 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBXN1Q04323 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
UBXN1Q04323 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBXN1Q04323 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBXN1Q04323 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
UBXN1Q04323 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBXN1Q04323 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
UBXN1Q04323 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBXN1Q04323 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
UBXN1Q04323 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.97■□□□□ 0.63
UBXN1Q04323 AC063952.2-201ENST00000498792 1227 ntBASIC18.97■□□□□ 0.63
UBXN1Q04323 AC122714.2-201ENST00000502787 707 ntBASIC18.97■□□□□ 0.63
UBXN1Q04323 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
UBXN1Q04323 AL592071.1-201ENST00000611956 408 ntBASIC18.97■□□□□ 0.63
UBXN1Q04323 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.97■□□□□ 0.63
UBXN1Q04323 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
UBXN1Q04323 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
UBXN1Q04323 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBXN1Q04323 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBXN1Q04323 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.97■□□□□ 0.63
UBXN1Q04323 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.97■□□□□ 0.63
UBXN1Q04323 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBXN1Q04323 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBXN1Q04323 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBXN1Q04323 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBXN1Q04323 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBXN1Q04323 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
UBXN1Q04323 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBXN1Q04323 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBXN1Q04323 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBXN1Q04323 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.96■□□□□ 0.63
UBXN1Q04323 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.96■□□□□ 0.63
UBXN1Q04323 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBXN1Q04323 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBXN1Q04323 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.96■□□□□ 0.63
UBXN1Q04323 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
UBXN1Q04323 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.96■□□□□ 0.63
UBXN1Q04323 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
UBXN1Q04323 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBXN1Q04323 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBXN1Q04323 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
UBXN1Q04323 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.96■□□□□ 0.63
UBXN1Q04323 AL671277.2-201ENST00000458060 996 ntBASIC18.96■□□□□ 0.63
UBXN1Q04323 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.96■□□□□ 0.63
UBXN1Q04323 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.96■□□□□ 0.63
UBXN1Q04323 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.96■□□□□ 0.63
UBXN1Q04323 AC111152.3-201ENST00000569699 673 ntBASIC18.96■□□□□ 0.63
UBXN1Q04323 AC005336.2-201ENST00000593183 939 ntBASIC18.96■□□□□ 0.63
UBXN1Q04323 AL138831.2-201ENST00000606564 490 ntBASIC18.96■□□□□ 0.63
UBXN1Q04323 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.96■□□□□ 0.63
UBXN1Q04323 KRT8P10-201ENST00000450021 1447 ntBASIC18.96■□□□□ 0.63
UBXN1Q04323 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBXN1Q04323 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.96■□□□□ 0.63
UBXN1Q04323 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBXN1Q04323 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBXN1Q04323 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBXN1Q04323 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
UBXN1Q04323 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
UBXN1Q04323 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
UBXN1Q04323 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.96■□□□□ 0.63
UBXN1Q04323 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBXN1Q04323 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBXN1Q04323 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBXN1Q04323 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBXN1Q04323 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
UBXN1Q04323 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.96■□□□□ 0.63
UBXN1Q04323 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.96■□□□□ 0.63
UBXN1Q04323 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBXN1Q04323 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBXN1Q04323 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBXN1Q04323 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBXN1Q04323 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBXN1Q04323 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBXN1Q04323 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.95■□□□□ 0.62
UBXN1Q04323 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBXN1Q04323 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.95■□□□□ 0.62
UBXN1Q04323 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBXN1Q04323 AL845331.1-201ENST00000424978 1190 ntBASIC18.95■□□□□ 0.62
UBXN1Q04323 AC103564.2-201ENST00000432853 1299 ntBASIC18.95■□□□□ 0.62
UBXN1Q04323 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.95■□□□□ 0.62
UBXN1Q04323 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.95■□□□□ 0.62
UBXN1Q04323 AL353801.3-201ENST00000609898 542 ntBASIC18.95■□□□□ 0.62
UBXN1Q04323 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.95■□□□□ 0.62
UBXN1Q04323 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.95■□□□□ 0.62
UBXN1Q04323 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBXN1Q04323 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.95■□□□□ 0.62
UBXN1Q04323 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBXN1Q04323 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBXN1Q04323 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBXN1Q04323 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms