Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS3AP61247 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPS3AP61247 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.29■□□□□ 0.2
RPS3AP61247 VENTXP7-201ENST00000475503 772 ntBASIC16.29■□□□□ 0.2
RPS3AP61247 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS3AP61247 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.29■□□□□ 0.2
RPS3AP61247 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.29■□□□□ 0.2
RPS3AP61247 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS3AP61247 AC092329.2-201ENST00000598402 547 ntBASIC16.29■□□□□ 0.2
RPS3AP61247 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS3AP61247 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS3AP61247 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
RPS3AP61247 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS3AP61247 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPS3AP61247 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS3AP61247 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS3AP61247 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
RPS3AP61247 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPS3AP61247 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RPS3AP61247 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS3AP61247 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS3AP61247 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS3AP61247 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RPS3AP61247 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPS3AP61247 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS3AP61247 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RPS3AP61247 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS3AP61247 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPS3AP61247 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.28■□□□□ 0.2
RPS3AP61247 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
RPS3AP61247 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPS3AP61247 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS3AP61247 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS3AP61247 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.28■□□□□ 0.2
RPS3AP61247 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.28■□□□□ 0.2
RPS3AP61247 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS3AP61247 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.28■□□□□ 0.2
RPS3AP61247 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPS3AP61247 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS3AP61247 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPS3AP61247 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RPS3AP61247 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS3AP61247 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPS3AP61247 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPS3AP61247 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.28■□□□□ 0.2
RPS3AP61247 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS3AP61247 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RPS3AP61247 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.28■□□□□ 0.2
RPS3AP61247 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.28■□□□□ 0.2
RPS3AP61247 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.28■□□□□ 0.2
RPS3AP61247 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.28■□□□□ 0.2
RPS3AP61247 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS3AP61247 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS3AP61247 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS3AP61247 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.28■□□□□ 0.2
RPS3AP61247 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS3AP61247 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.28■□□□□ 0.2
RPS3AP61247 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.28■□□□□ 0.2
RPS3AP61247 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RPS3AP61247 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RPS3AP61247 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.28■□□□□ 0.2
RPS3AP61247 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS3AP61247 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RPS3AP61247 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.28■□□□□ 0.2
RPS3AP61247 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RPS3AP61247 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RPS3AP61247 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RPS3AP61247 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPS3AP61247 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.27■□□□□ 0.2
RPS3AP61247 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RPS3AP61247 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.27■□□□□ 0.2
RPS3AP61247 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPS3AP61247 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RPS3AP61247 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.27■□□□□ 0.2
RPS3AP61247 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RPS3AP61247 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RPS3AP61247 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RPS3AP61247 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.27■□□□□ 0.2
RPS3AP61247 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.27■□□□□ 0.2
RPS3AP61247 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RPS3AP61247 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RPS3AP61247 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.27■□□□□ 0.2
RPS3AP61247 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.27■□□□□ 0.2
RPS3AP61247 AP002414.4-201ENST00000589764 1148 ntBASIC16.27■□□□□ 0.2
RPS3AP61247 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.27■□□□□ 0.2
RPS3AP61247 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RPS3AP61247 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RPS3AP61247 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RPS3AP61247 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RPS3AP61247 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RPS3AP61247 AC008741.2-201ENST00000612792 3115 ntBASIC16.27■□□□□ 0.19
RPS3AP61247 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RPS3AP61247 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RPS3AP61247 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.26■□□□□ 0.19
RPS3AP61247 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.26■□□□□ 0.19
RPS3AP61247 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RPS3AP61247 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPS3AP61247 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPS3AP61247 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RPS3AP61247 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms