Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN6P56747 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN6P56747 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDN6P56747 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN6P56747 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN6P56747 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN6P56747 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN6P56747 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN6P56747 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.56■□□□□ 0.24
CLDN6P56747 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN6P56747 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN6P56747 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.56■□□□□ 0.24
CLDN6P56747 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN6P56747 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN6P56747 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN6P56747 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN6P56747 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN6P56747 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN6P56747 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN6P56747 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN6P56747 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.56■□□□□ 0.24
CLDN6P56747 AC005237.2-201ENST00000434368 219 ntBASIC16.56■□□□□ 0.24
CLDN6P56747 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.56■□□□□ 0.24
CLDN6P56747 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CLDN6P56747 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN6P56747 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.56■□□□□ 0.24
CLDN6P56747 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.56■□□□□ 0.24
CLDN6P56747 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN6P56747 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN6P56747 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN6P56747 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.56■□□□□ 0.24
CLDN6P56747 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN6P56747 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN6P56747 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN6P56747 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN6P56747 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN6P56747 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN6P56747 AC073592.3-201ENST00000625118 1834 ntBASIC16.56■□□□□ 0.24
CLDN6P56747 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN6P56747 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
CLDN6P56747 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CLDN6P56747 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN6P56747 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN6P56747 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN6P56747 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN6P56747 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN6P56747 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN6P56747 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CLDN6P56747 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN6P56747 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN6P56747 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN6P56747 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN6P56747 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN6P56747 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.55■□□□□ 0.24
CLDN6P56747 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN6P56747 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN6P56747 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN6P56747 AC093677.2-201ENST00000600169 1863 ntBASIC16.55■□□□□ 0.24
CLDN6P56747 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN6P56747 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN6P56747 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN6P56747 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN6P56747 AC236430.1-201ENST00000402231 743 ntBASIC16.55■□□□□ 0.24
CLDN6P56747 UGT1A2P-201ENST00000454886 866 ntBASIC16.55■□□□□ 0.24
CLDN6P56747 SLC25A6P2-201ENST00000497974 877 ntBASIC16.55■□□□□ 0.24
CLDN6P56747 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN6P56747 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.55■□□□□ 0.24
CLDN6P56747 AC099522.2-201ENST00000607001 744 ntBASIC16.55■□□□□ 0.24
CLDN6P56747 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CLDN6P56747 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.55■□□□□ 0.24
CLDN6P56747 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN6P56747 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN6P56747 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN6P56747 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CLDN6P56747 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CLDN6P56747 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN6P56747 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN6P56747 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CLDN6P56747 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN6P56747 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CLDN6P56747 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN6P56747 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CLDN6P56747 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.55■□□□□ 0.24
CLDN6P56747 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN6P56747 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.54■□□□□ 0.24
CLDN6P56747 AP000997.3-201ENST00000623333 2250 ntBASIC16.54■□□□□ 0.24
CLDN6P56747 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN6P56747 REXO1L9P-201ENST00000604264 2108 ntBASIC16.54■□□□□ 0.24
CLDN6P56747 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN6P56747 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN6P56747 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN6P56747 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN6P56747 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN6P56747 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN6P56747 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.54■□□□□ 0.24
CLDN6P56747 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CLDN6P56747 AL355306.1-201ENST00000415580 579 ntBASIC16.54■□□□□ 0.24
CLDN6P56747 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.54■□□□□ 0.24
CLDN6P56747 FAM58DP-201ENST00000428076 619 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms