Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.49■□□□□ 0.39
WNT3AP56704 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
WNT3AP56704 EGFEM1P-202ENST00000431685 1563 ntBASIC17.49■□□□□ 0.39
WNT3AP56704 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
WNT3AP56704 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
WNT3AP56704 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.48■□□□□ 0.39
WNT3AP56704 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
WNT3AP56704 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.48■□□□□ 0.39
WNT3AP56704 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
WNT3AP56704 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
WNT3AP56704 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
WNT3AP56704 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.48■□□□□ 0.39
WNT3AP56704 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
WNT3AP56704 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
WNT3AP56704 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
WNT3AP56704 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
WNT3AP56704 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
WNT3AP56704 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
WNT3AP56704 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.48■□□□□ 0.39
WNT3AP56704 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
WNT3AP56704 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.48■□□□□ 0.39
WNT3AP56704 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
WNT3AP56704 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
WNT3AP56704 NKAPP1-205ENST00000585790 367 ntBASIC17.48■□□□□ 0.39
WNT3AP56704 AC008608.2-201ENST00000606089 416 ntBASIC17.48■□□□□ 0.39
WNT3AP56704 IFNL4P1-201ENST00000607083 540 ntBASIC17.48■□□□□ 0.39
WNT3AP56704 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
WNT3AP56704 AL356309.3-201ENST00000624132 1934 ntBASIC17.48■□□□□ 0.39
WNT3AP56704 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.48■□□□□ 0.39
WNT3AP56704 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
WNT3AP56704 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
WNT3AP56704 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
WNT3AP56704 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
WNT3AP56704 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
WNT3AP56704 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
WNT3AP56704 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
WNT3AP56704 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
WNT3AP56704 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.47■□□□□ 0.39
WNT3AP56704 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.47■□□□□ 0.39
WNT3AP56704 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
WNT3AP56704 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
WNT3AP56704 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
WNT3AP56704 AC092053.1-201ENST00000605787 1936 ntBASIC17.47■□□□□ 0.39
WNT3AP56704 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
WNT3AP56704 AC022211.2-201ENST00000585075 2527 ntBASIC17.47■□□□□ 0.39
WNT3AP56704 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
WNT3AP56704 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
WNT3AP56704 ACTG1P4-201ENST00000425123 1122 ntBASIC17.47■□□□□ 0.39
WNT3AP56704 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.47■□□□□ 0.39
WNT3AP56704 PRYP5-201ENST00000451909 266 ntBASIC17.47■□□□□ 0.39
WNT3AP56704 FGFR3P6-201ENST00000457012 610 ntBASIC17.47■□□□□ 0.39
WNT3AP56704 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.47■□□□□ 0.39
WNT3AP56704 UNC93B7-201ENST00000509439 705 ntBASIC17.47■□□□□ 0.39
WNT3AP56704 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.47■□□□□ 0.39
WNT3AP56704 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.47■□□□□ 0.39
WNT3AP56704 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.47■□□□□ 0.39
WNT3AP56704 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.47■□□□□ 0.39
WNT3AP56704 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.47■□□□□ 0.39
WNT3AP56704 AL139288.1-201ENST00000623748 933 ntBASIC17.47■□□□□ 0.39
WNT3AP56704 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
WNT3AP56704 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
WNT3AP56704 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.47■□□□□ 0.39
WNT3AP56704 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.47■□□□□ 0.39
WNT3AP56704 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
WNT3AP56704 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.47■□□□□ 0.39
WNT3AP56704 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
WNT3AP56704 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
WNT3AP56704 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
WNT3AP56704 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
WNT3AP56704 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
WNT3AP56704 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
WNT3AP56704 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
WNT3AP56704 AC060834.1-201ENST00000443027 2032 ntBASIC17.47■□□□□ 0.39
WNT3AP56704 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
WNT3AP56704 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
WNT3AP56704 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
WNT3AP56704 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
WNT3AP56704 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
WNT3AP56704 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.46■□□□□ 0.39
WNT3AP56704 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.46■□□□□ 0.39
WNT3AP56704 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
WNT3AP56704 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.46■□□□□ 0.39
WNT3AP56704 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.46■□□□□ 0.39
WNT3AP56704 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
WNT3AP56704 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.46■□□□□ 0.39
WNT3AP56704 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
WNT3AP56704 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.46■□□□□ 0.39
WNT3AP56704 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
WNT3AP56704 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
WNT3AP56704 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.46■□□□□ 0.39
WNT3AP56704 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.46■□□□□ 0.39
WNT3AP56704 DUSP5P1-201ENST00000441325 1139 ntBASIC17.46■□□□□ 0.39
WNT3AP56704 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
WNT3AP56704 SAPCD2P3-201ENST00000455031 850 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms