Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CMC4P56277 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CMC4P56277 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CMC4P56277 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC12.89□□□□□ -0.35
CMC4P56277 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CMC4P56277 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CMC4P56277 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CMC4P56277 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CMC4P56277 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC12.89□□□□□ -0.35
CMC4P56277 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CMC4P56277 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
CMC4P56277 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CMC4P56277 AL135999.2-201ENST00000622438 1686 ntBASIC12.89□□□□□ -0.35
CMC4P56277 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC12.89□□□□□ -0.35
CMC4P56277 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CMC4P56277 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CMC4P56277 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC12.88□□□□□ -0.35
CMC4P56277 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.88□□□□□ -0.35
CMC4P56277 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
CMC4P56277 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
CMC4P56277 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
CMC4P56277 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC12.88□□□□□ -0.35
CMC4P56277 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC12.88□□□□□ -0.35
CMC4P56277 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.88□□□□□ -0.35
CMC4P56277 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.88□□□□□ -0.35
CMC4P56277 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.88□□□□□ -0.35
CMC4P56277 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CMC4P56277 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.88□□□□□ -0.35
CMC4P56277 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CMC4P56277 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.88□□□□□ -0.35
CMC4P56277 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.88□□□□□ -0.35
CMC4P56277 CYB561-217ENST00000582997 877 ntTSL 5 BASIC12.88□□□□□ -0.35
CMC4P56277 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CMC4P56277 AC104692.2-201ENST00000603054 253 ntBASIC12.88□□□□□ -0.35
CMC4P56277 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.88□□□□□ -0.35
CMC4P56277 AC004706.3-202ENST00000621574 984 ntBASIC12.88□□□□□ -0.35
CMC4P56277 AC005593.1-201ENST00000624894 515 ntBASIC12.88□□□□□ -0.35
CMC4P56277 GPR89P-201ENST00000407924 1495 ntBASIC12.88□□□□□ -0.35
CMC4P56277 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
CMC4P56277 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.88□□□□□ -0.35
CMC4P56277 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CMC4P56277 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC12.88□□□□□ -0.35
CMC4P56277 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
CMC4P56277 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CMC4P56277 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC12.88□□□□□ -0.35
CMC4P56277 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CMC4P56277 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC12.87□□□□□ -0.35
CMC4P56277 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CMC4P56277 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.87□□□□□ -0.35
CMC4P56277 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CMC4P56277 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 AL031284.1-201ENST00000419297 478 ntBASIC12.87□□□□□ -0.35
CMC4P56277 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.87□□□□□ -0.35
CMC4P56277 AC079781.3-201ENST00000449110 356 ntBASIC12.87□□□□□ -0.35
CMC4P56277 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.87□□□□□ -0.35
CMC4P56277 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.87□□□□□ -0.35
CMC4P56277 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CMC4P56277 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
CMC4P56277 AL353135.1-201ENST00000606729 504 ntBASIC12.87□□□□□ -0.35
CMC4P56277 AC008735.5-201ENST00000623544 497 ntBASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms