Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
SUMO3P55854 AL031008.1-201ENST00000619963 541 ntBASIC15.65■□□□□ 0.1
SUMO3P55854 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SUMO3P55854 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SUMO3P55854 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.65■□□□□ 0.1
SUMO3P55854 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.65■□□□□ 0.1
SUMO3P55854 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.65■□□□□ 0.1
SUMO3P55854 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.65■□□□□ 0.1
SUMO3P55854 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SUMO3P55854 AL590787.1-201ENST00000568856 1315 ntBASIC15.65■□□□□ 0.1
SUMO3P55854 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SUMO3P55854 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SUMO3P55854 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SUMO3P55854 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
SUMO3P55854 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.64■□□□□ 0.09
SUMO3P55854 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SUMO3P55854 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SUMO3P55854 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.64■□□□□ 0.09
SUMO3P55854 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SUMO3P55854 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SUMO3P55854 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SUMO3P55854 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SUMO3P55854 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.64■□□□□ 0.09
SUMO3P55854 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SUMO3P55854 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SUMO3P55854 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.64■□□□□ 0.09
SUMO3P55854 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SUMO3P55854 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.64■□□□□ 0.09
SUMO3P55854 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.64■□□□□ 0.09
SUMO3P55854 AP002469.2-201ENST00000531724 424 ntBASIC15.64■□□□□ 0.09
SUMO3P55854 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.64■□□□□ 0.09
SUMO3P55854 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.64■□□□□ 0.09
SUMO3P55854 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.64■□□□□ 0.09
SUMO3P55854 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.64■□□□□ 0.09
SUMO3P55854 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.64■□□□□ 0.09
SUMO3P55854 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.64■□□□□ 0.09
SUMO3P55854 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SUMO3P55854 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SUMO3P55854 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SUMO3P55854 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SUMO3P55854 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.64■□□□□ 0.09
SUMO3P55854 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.64■□□□□ 0.09
SUMO3P55854 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SUMO3P55854 PKD1P1-201ENST00000458669 6805 ntBASIC15.64■□□□□ 0.09
SUMO3P55854 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SUMO3P55854 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SUMO3P55854 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.63■□□□□ 0.09
SUMO3P55854 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SUMO3P55854 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SUMO3P55854 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SUMO3P55854 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SUMO3P55854 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SUMO3P55854 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SUMO3P55854 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SUMO3P55854 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SUMO3P55854 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SUMO3P55854 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.63■□□□□ 0.09
SUMO3P55854 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.63■□□□□ 0.09
SUMO3P55854 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SUMO3P55854 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.63■□□□□ 0.09
SUMO3P55854 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.63■□□□□ 0.09
SUMO3P55854 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.63■□□□□ 0.09
SUMO3P55854 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.63■□□□□ 0.09
SUMO3P55854 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.63■□□□□ 0.09
SUMO3P55854 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.63■□□□□ 0.09
SUMO3P55854 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.63■□□□□ 0.09
SUMO3P55854 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.63■□□□□ 0.09
SUMO3P55854 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.63■□□□□ 0.09
SUMO3P55854 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SUMO3P55854 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.63■□□□□ 0.09
SUMO3P55854 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.63■□□□□ 0.09
SUMO3P55854 AC008735.5-201ENST00000623544 497 ntBASIC15.63■□□□□ 0.09
SUMO3P55854 AL805961.1-202ENST00000641562 540 ntBASIC15.63■□□□□ 0.09
SUMO3P55854 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SUMO3P55854 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SUMO3P55854 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SUMO3P55854 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.63■□□□□ 0.09
SUMO3P55854 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.63■□□□□ 0.09
SUMO3P55854 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
SUMO3P55854 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
SUMO3P55854 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.63■□□□□ 0.09
SUMO3P55854 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SUMO3P55854 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.63■□□□□ 0.09
SUMO3P55854 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SUMO3P55854 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SUMO3P55854 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.62■□□□□ 0.09
SUMO3P55854 AC020916.1-201ENST00000587762 1774 ntBASIC15.62■□□□□ 0.09
SUMO3P55854 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.62■□□□□ 0.09
SUMO3P55854 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SUMO3P55854 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SUMO3P55854 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
SUMO3P55854 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SUMO3P55854 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SUMO3P55854 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.62■□□□□ 0.09
SUMO3P55854 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SUMO3P55854 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SUMO3P55854 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SUMO3P55854 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.62■□□□□ 0.09
SUMO3P55854 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
SUMO3P55854 AP002414.1-201ENST00000391405 1147 ntBASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms