Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH11P55287 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH11P55287 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH11P55287 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH11P55287 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH11P55287 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH11P55287 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH11P55287 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH11P55287 PCDHA14-201ENST00000506751 2298 ntBASIC15.88■□□□□ 0.13
CDH11P55287 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH11P55287 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH11P55287 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH11P55287 LYSMD4-203ENST00000378904 2122 ntBASIC15.88■□□□□ 0.13
CDH11P55287 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH11P55287 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH11P55287 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH11P55287 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH11P55287 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH11P55287 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
CDH11P55287 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH11P55287 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH11P55287 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH11P55287 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH11P55287 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH11P55287 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH11P55287 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDH11P55287 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.88■□□□□ 0.13
CDH11P55287 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.88■□□□□ 0.13
CDH11P55287 AP003733.1-201ENST00000491725 852 ntBASIC15.88■□□□□ 0.13
CDH11P55287 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.88■□□□□ 0.13
CDH11P55287 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CDH11P55287 MIR3652-201ENST00000579335 131 ntBASIC15.88■□□□□ 0.13
CDH11P55287 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.88■□□□□ 0.13
CDH11P55287 AP002414.4-201ENST00000589764 1148 ntBASIC15.88■□□□□ 0.13
CDH11P55287 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CDH11P55287 AL691432.3-201ENST00000621860 400 ntBASIC15.88■□□□□ 0.13
CDH11P55287 AC012313.10-201ENST00000623509 926 ntBASIC15.88■□□□□ 0.13
CDH11P55287 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH11P55287 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.88■□□□□ 0.13
CDH11P55287 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH11P55287 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH11P55287 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CDH11P55287 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH11P55287 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CDH11P55287 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
CDH11P55287 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CDH11P55287 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CDH11P55287 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CDH11P55287 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH11P55287 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH11P55287 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH11P55287 AC105020.1-201ENST00000435356 2205 ntBASIC15.87■□□□□ 0.13
CDH11P55287 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH11P55287 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH11P55287 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH11P55287 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH11P55287 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CDH11P55287 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CDH11P55287 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH11P55287 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH11P55287 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH11P55287 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH11P55287 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH11P55287 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH11P55287 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH11P55287 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH11P55287 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH11P55287 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH11P55287 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH11P55287 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH11P55287 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH11P55287 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH11P55287 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.87■□□□□ 0.13
CDH11P55287 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH11P55287 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.87■□□□□ 0.13
CDH11P55287 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.87■□□□□ 0.13
CDH11P55287 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.87■□□□□ 0.13
CDH11P55287 AL121894.2-201ENST00000602977 491 ntBASIC15.87■□□□□ 0.13
CDH11P55287 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH11P55287 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH11P55287 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH11P55287 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH11P55287 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH11P55287 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH11P55287 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
CDH11P55287 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.87■□□□□ 0.13
CDH11P55287 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CDH11P55287 KRT18P1-202ENST00000452408 1331 ntBASIC15.87■□□□□ 0.13
CDH11P55287 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH11P55287 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CDH11P55287 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH11P55287 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CDH11P55287 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
CDH11P55287 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH11P55287 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH11P55287 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
CDH11P55287 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH11P55287 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.87■□□□□ 0.13
CDH11P55287 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms