Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 AC140658.5-201ENST00000438532 169 ntBASIC20.37■□□□□ 0.85
CACNB3P54284 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.37■□□□□ 0.85
CACNB3P54284 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CACNB3P54284 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CACNB3P54284 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CACNB3P54284 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CACNB3P54284 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.37■□□□□ 0.85
CACNB3P54284 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CACNB3P54284 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CACNB3P54284 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CACNB3P54284 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CACNB3P54284 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.36■□□□□ 0.85
CACNB3P54284 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CACNB3P54284 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CACNB3P54284 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.36■□□□□ 0.85
CACNB3P54284 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
CACNB3P54284 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CACNB3P54284 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CACNB3P54284 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CACNB3P54284 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.36■□□□□ 0.85
CACNB3P54284 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CACNB3P54284 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
CACNB3P54284 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CACNB3P54284 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.36■□□□□ 0.85
CACNB3P54284 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.36■□□□□ 0.85
CACNB3P54284 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.36■□□□□ 0.85
CACNB3P54284 AC025678.2-201ENST00000562061 970 ntBASIC20.36■□□□□ 0.85
CACNB3P54284 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.36■□□□□ 0.85
CACNB3P54284 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.36■□□□□ 0.85
CACNB3P54284 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CACNB3P54284 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CACNB3P54284 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.36■□□□□ 0.85
CACNB3P54284 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CACNB3P54284 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.36■□□□□ 0.85
CACNB3P54284 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.35■□□□□ 0.85
CACNB3P54284 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CACNB3P54284 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CACNB3P54284 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CACNB3P54284 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CACNB3P54284 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CACNB3P54284 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CACNB3P54284 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CACNB3P54284 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CACNB3P54284 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CACNB3P54284 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CACNB3P54284 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.35■□□□□ 0.85
CACNB3P54284 AC005237.2-201ENST00000434368 219 ntBASIC20.35■□□□□ 0.85
CACNB3P54284 SPDYE11-202ENST00000450699 704 ntBASIC20.35■□□□□ 0.85
CACNB3P54284 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.35■□□□□ 0.85
CACNB3P54284 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.35■□□□□ 0.85
CACNB3P54284 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CACNB3P54284 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.35■□□□□ 0.85
CACNB3P54284 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.35■□□□□ 0.85
CACNB3P54284 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
CACNB3P54284 SPDYE9P-201ENST00000570642 692 ntBASIC20.35■□□□□ 0.85
CACNB3P54284 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.35■□□□□ 0.85
CACNB3P54284 SPDYE10P-202ENST00000612005 668 ntBASIC20.35■□□□□ 0.85
CACNB3P54284 SPDYE8P-202ENST00000612377 668 ntBASIC20.35■□□□□ 0.85
CACNB3P54284 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC20.35■□□□□ 0.85
CACNB3P54284 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.35■□□□□ 0.85
CACNB3P54284 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CACNB3P54284 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CACNB3P54284 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CACNB3P54284 AL354751.1-201ENST00000412768 1863 ntBASIC20.35■□□□□ 0.85
CACNB3P54284 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
CACNB3P54284 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CACNB3P54284 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CACNB3P54284 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CACNB3P54284 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
CACNB3P54284 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CACNB3P54284 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.34■□□□□ 0.85
CACNB3P54284 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CACNB3P54284 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CACNB3P54284 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.34■□□□□ 0.85
CACNB3P54284 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CACNB3P54284 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CACNB3P54284 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CACNB3P54284 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CACNB3P54284 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.34■□□□□ 0.85
CACNB3P54284 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CACNB3P54284 AL035633.1-201ENST00000406139 838 ntBASIC20.34■□□□□ 0.85
CACNB3P54284 FAM58DP-201ENST00000428076 619 ntBASIC20.34■□□□□ 0.85
CACNB3P54284 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CACNB3P54284 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CACNB3P54284 AC079140.1-201ENST00000508039 487 ntBASIC20.34■□□□□ 0.85
CACNB3P54284 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.34■□□□□ 0.85
CACNB3P54284 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.34■□□□□ 0.85
CACNB3P54284 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.34■□□□□ 0.85
CACNB3P54284 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CACNB3P54284 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CACNB3P54284 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
CACNB3P54284 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.34■□□□□ 0.85
CACNB3P54284 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.34■□□□□ 0.85
CACNB3P54284 DUX4L27-201ENST00000554796 1261 ntBASIC20.34■□□□□ 0.85
CACNB3P54284 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CACNB3P54284 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.34■□□□□ 0.85
CACNB3P54284 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC20.34■□□□□ 0.85
CACNB3P54284 AL390955.2-201ENST00000603032 514 ntBASIC20.34■□□□□ 0.85
CACNB3P54284 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.34■□□□□ 0.85
CACNB3P54284 AC009093.7-201ENST00000623853 1223 ntBASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms