Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LIMK2P53671 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.45■□□□□ 0.38
LIMK2P53671 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.45■□□□□ 0.38
LIMK2P53671 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LIMK2P53671 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LIMK2P53671 MYCLP1-201ENST00000372451 1075 ntBASIC17.45■□□□□ 0.38
LIMK2P53671 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.45■□□□□ 0.38
LIMK2P53671 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
LIMK2P53671 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.45■□□□□ 0.38
LIMK2P53671 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.45■□□□□ 0.38
LIMK2P53671 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LIMK2P53671 SLC25A6P4-201ENST00000586535 553 ntBASIC17.45■□□□□ 0.38
LIMK2P53671 BNIP3P18-201ENST00000593976 575 ntBASIC17.45■□□□□ 0.38
LIMK2P53671 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LIMK2P53671 AC019129.2-201ENST00000609837 1235 ntBASIC17.45■□□□□ 0.38
LIMK2P53671 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LIMK2P53671 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.45■□□□□ 0.38
LIMK2P53671 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.45■□□□□ 0.38
LIMK2P53671 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LIMK2P53671 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.45■□□□□ 0.38
LIMK2P53671 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LIMK2P53671 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LIMK2P53671 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LIMK2P53671 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LIMK2P53671 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LIMK2P53671 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LIMK2P53671 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LIMK2P53671 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LIMK2P53671 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LIMK2P53671 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LIMK2P53671 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LIMK2P53671 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
LIMK2P53671 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LIMK2P53671 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LIMK2P53671 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LIMK2P53671 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LIMK2P53671 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.44■□□□□ 0.38
LIMK2P53671 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.44■□□□□ 0.38
LIMK2P53671 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LIMK2P53671 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LIMK2P53671 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LIMK2P53671 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LIMK2P53671 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
LIMK2P53671 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LIMK2P53671 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.44■□□□□ 0.38
LIMK2P53671 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LIMK2P53671 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.44■□□□□ 0.38
LIMK2P53671 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LIMK2P53671 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.44■□□□□ 0.38
LIMK2P53671 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.44■□□□□ 0.38
LIMK2P53671 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.44■□□□□ 0.38
LIMK2P53671 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.44■□□□□ 0.38
LIMK2P53671 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LIMK2P53671 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.44■□□□□ 0.38
LIMK2P53671 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.44■□□□□ 0.38
LIMK2P53671 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LIMK2P53671 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LIMK2P53671 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LIMK2P53671 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LIMK2P53671 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LIMK2P53671 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.44■□□□□ 0.38
LIMK2P53671 AC093525.9-201ENST00000624961 1746 ntBASIC17.44■□□□□ 0.38
LIMK2P53671 AGGF1P2-201ENST00000426656 2106 ntBASIC17.44■□□□□ 0.38
LIMK2P53671 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.44■□□□□ 0.38
LIMK2P53671 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LIMK2P53671 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LIMK2P53671 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.44■□□□□ 0.38
LIMK2P53671 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIMK2P53671 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LIMK2P53671 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIMK2P53671 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIMK2P53671 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIMK2P53671 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.43■□□□□ 0.38
LIMK2P53671 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
LIMK2P53671 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIMK2P53671 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LIMK2P53671 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LIMK2P53671 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIMK2P53671 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIMK2P53671 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIMK2P53671 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.43■□□□□ 0.38
LIMK2P53671 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIMK2P53671 AC007967.3-201ENST00000434308 558 ntBASIC17.43■□□□□ 0.38
LIMK2P53671 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
LIMK2P53671 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.43■□□□□ 0.38
LIMK2P53671 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.43■□□□□ 0.38
LIMK2P53671 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.43■□□□□ 0.38
LIMK2P53671 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.43■□□□□ 0.38
LIMK2P53671 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.43■□□□□ 0.38
LIMK2P53671 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.43■□□□□ 0.38
LIMK2P53671 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.43■□□□□ 0.38
LIMK2P53671 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LIMK2P53671 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LIMK2P53671 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIMK2P53671 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.43■□□□□ 0.38
LIMK2P53671 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIMK2P53671 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LIMK2P53671 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.43■□□□□ 0.38
LIMK2P53671 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIMK2P53671 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms