Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ACLYP53396 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ACLYP53396 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ACLYP53396 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ACLYP53396 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ACLYP53396 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
ACLYP53396 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACLYP53396 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACLYP53396 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ACLYP53396 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ACLYP53396 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ACLYP53396 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ACLYP53396 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.92■□□□□ 0.62
ACLYP53396 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACLYP53396 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ACLYP53396 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.92■□□□□ 0.62
ACLYP53396 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACLYP53396 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ACLYP53396 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACLYP53396 GAPDHP21-201ENST00000450301 1010 ntBASIC18.92■□□□□ 0.62
ACLYP53396 AL512638.1-201ENST00000457493 794 ntBASIC18.92■□□□□ 0.62
ACLYP53396 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ACLYP53396 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACLYP53396 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.92■□□□□ 0.62
ACLYP53396 LINC01451-201ENST00000623792 534 ntBASIC18.92■□□□□ 0.62
ACLYP53396 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACLYP53396 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACLYP53396 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACLYP53396 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
ACLYP53396 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
ACLYP53396 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ACLYP53396 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ACLYP53396 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ACLYP53396 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.91■□□□□ 0.62
ACLYP53396 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.91■□□□□ 0.62
ACLYP53396 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ACLYP53396 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.91■□□□□ 0.62
ACLYP53396 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ACLYP53396 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ACLYP53396 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ACLYP53396 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ACLYP53396 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ACLYP53396 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ACLYP53396 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ACLYP53396 AC097493.3-201ENST00000509725 367 ntBASIC18.91■□□□□ 0.62
ACLYP53396 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.91■□□□□ 0.62
ACLYP53396 AC069120.2-201ENST00000524091 540 ntBASIC18.91■□□□□ 0.62
ACLYP53396 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.91■□□□□ 0.62
ACLYP53396 AC109635.5-201ENST00000533593 962 ntBASIC18.91■□□□□ 0.62
ACLYP53396 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.91■□□□□ 0.62
ACLYP53396 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.91■□□□□ 0.62
ACLYP53396 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.91■□□□□ 0.62
ACLYP53396 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ACLYP53396 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.91■□□□□ 0.62
ACLYP53396 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.91■□□□□ 0.62
ACLYP53396 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ACLYP53396 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ACLYP53396 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ACLYP53396 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ACLYP53396 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.91■□□□□ 0.62
ACLYP53396 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ACLYP53396 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.9■□□□□ 0.62
ACLYP53396 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ACLYP53396 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.9■□□□□ 0.62
ACLYP53396 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ACLYP53396 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ACLYP53396 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.9■□□□□ 0.62
ACLYP53396 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.9■□□□□ 0.62
ACLYP53396 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ACLYP53396 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ACLYP53396 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ACLYP53396 HLA-J-202ENST00000469281 1241 ntBASIC18.9■□□□□ 0.62
ACLYP53396 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.9■□□□□ 0.62
ACLYP53396 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ACLYP53396 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.9■□□□□ 0.62
ACLYP53396 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
ACLYP53396 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ACLYP53396 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.9■□□□□ 0.62
ACLYP53396 MIR6080-201ENST00000617359 66 ntBASIC18.9■□□□□ 0.62
ACLYP53396 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ACLYP53396 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ACLYP53396 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ACLYP53396 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ACLYP53396 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.9■□□□□ 0.62
ACLYP53396 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ACLYP53396 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ACLYP53396 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ACLYP53396 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.9■□□□□ 0.62
ACLYP53396 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ACLYP53396 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ACLYP53396 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ACLYP53396 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ACLYP53396 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ACLYP53396 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.89■□□□□ 0.61
ACLYP53396 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
ACLYP53396 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
ACLYP53396 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
ACLYP53396 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ACLYP53396 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.89■□□□□ 0.61
ACLYP53396 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms