Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SRP9P49458 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP9P49458 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SRP9P49458 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRP9P49458 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRP9P49458 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRP9P49458 AC100803.2-201ENST00000562459 1963 ntBASIC15.4■□□□□ 0.06
SRP9P49458 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.4■□□□□ 0.06
SRP9P49458 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP9P49458 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP9P49458 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SRP9P49458 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP9P49458 AC132872.4-202ENST00000622924 2756 ntBASIC15.4■□□□□ 0.06
SRP9P49458 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP9P49458 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP9P49458 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRP9P49458 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP9P49458 IGHGP-201ENST00000390555 1178 ntBASIC15.4■□□□□ 0.06
SRP9P49458 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRP9P49458 PCED1CP-201ENST00000419887 785 ntBASIC15.4■□□□□ 0.06
SRP9P49458 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.4■□□□□ 0.06
SRP9P49458 SPDYE13P-201ENST00000445314 798 ntBASIC15.4■□□□□ 0.06
SRP9P49458 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.4■□□□□ 0.06
SRP9P49458 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.4■□□□□ 0.06
SRP9P49458 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
SRP9P49458 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP9P49458 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
SRP9P49458 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRP9P49458 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP9P49458 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
SRP9P49458 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP9P49458 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP9P49458 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP9P49458 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRP9P49458 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP9P49458 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.4■□□□□ 0.06
SRP9P49458 AC005332.1-201ENST00000577698 1310 ntBASIC15.4■□□□□ 0.06
SRP9P49458 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRP9P49458 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SRP9P49458 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SRP9P49458 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
SRP9P49458 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.39■□□□□ 0.05
SRP9P49458 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRP9P49458 IER3-202ENST00000376377 1350 ntBASIC15.39■□□□□ 0.05
SRP9P49458 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRP9P49458 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.39■□□□□ 0.05
SRP9P49458 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRP9P49458 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRP9P49458 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRP9P49458 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRP9P49458 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRP9P49458 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.39■□□□□ 0.05
SRP9P49458 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRP9P49458 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SRP9P49458 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.39■□□□□ 0.05
SRP9P49458 AC005332.3-201ENST00000589904 676 ntBASIC15.39■□□□□ 0.05
SRP9P49458 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.39■□□□□ 0.05
SRP9P49458 AC011498.5-201ENST00000592027 486 ntBASIC15.39■□□□□ 0.05
SRP9P49458 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.39■□□□□ 0.05
SRP9P49458 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.39■□□□□ 0.05
SRP9P49458 AP000550.4-202ENST00000639755 178 ntBASIC15.39■□□□□ 0.05
SRP9P49458 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRP9P49458 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SRP9P49458 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SRP9P49458 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRP9P49458 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.39■□□□□ 0.05
SRP9P49458 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.39■□□□□ 0.05
SRP9P49458 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRP9P49458 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.39■□□□□ 0.05
SRP9P49458 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SRP9P49458 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRP9P49458 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRP9P49458 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SRP9P49458 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRP9P49458 AL603756.1-201ENST00000606511 2163 ntBASIC15.39■□□□□ 0.05
SRP9P49458 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SRP9P49458 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRP9P49458 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRP9P49458 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRP9P49458 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRP9P49458 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRP9P49458 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SRP9P49458 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SRP9P49458 AC068418.2-201ENST00000577309 3703 ntBASIC15.39■□□□□ 0.05
SRP9P49458 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRP9P49458 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SRP9P49458 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
SRP9P49458 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SRP9P49458 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SRP9P49458 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SRP9P49458 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SRP9P49458 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.38■□□□□ 0.05
SRP9P49458 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
SRP9P49458 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
SRP9P49458 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.38■□□□□ 0.05
SRP9P49458 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SRP9P49458 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SRP9P49458 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SRP9P49458 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.38■□□□□ 0.05
SRP9P49458 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms