Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRCC3P46736 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRCC3P46736 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRCC3P46736 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
BRCC3P46736 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRCC3P46736 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.34■□□□□ 0.53
BRCC3P46736 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRCC3P46736 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.34■□□□□ 0.53
BRCC3P46736 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
BRCC3P46736 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
BRCC3P46736 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
BRCC3P46736 DNAJB3-202ENST00000449667 1266 ntBASIC18.34■□□□□ 0.53
BRCC3P46736 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.34■□□□□ 0.53
BRCC3P46736 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.34■□□□□ 0.53
BRCC3P46736 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.34■□□□□ 0.53
BRCC3P46736 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
BRCC3P46736 MIR4469-201ENST00000583919 79 ntBASIC18.34■□□□□ 0.53
BRCC3P46736 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.34■□□□□ 0.53
BRCC3P46736 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.34■□□□□ 0.53
BRCC3P46736 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.34■□□□□ 0.53
BRCC3P46736 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRCC3P46736 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRCC3P46736 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRCC3P46736 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRCC3P46736 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRCC3P46736 AC138932.1-201ENST00000534164 6830 ntBASIC18.34■□□□□ 0.53
BRCC3P46736 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRCC3P46736 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRCC3P46736 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.33■□□□□ 0.53
BRCC3P46736 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BRCC3P46736 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRCC3P46736 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRCC3P46736 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRCC3P46736 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRCC3P46736 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
BRCC3P46736 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.33■□□□□ 0.53
BRCC3P46736 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRCC3P46736 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRCC3P46736 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
BRCC3P46736 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.33■□□□□ 0.52
BRCC3P46736 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.33■□□□□ 0.52
BRCC3P46736 FAM185BP-201ENST00000443595 716 ntBASIC18.33■□□□□ 0.52
BRCC3P46736 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRCC3P46736 AC023141.13-201ENST00000604991 943 ntBASIC18.33■□□□□ 0.52
BRCC3P46736 ACTL9-202ENST00000612068 1252 ntBASIC18.33■□□□□ 0.52
BRCC3P46736 C20orf181-201ENST00000623918 480 ntBASIC18.33■□□□□ 0.52
BRCC3P46736 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRCC3P46736 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.33■□□□□ 0.52
BRCC3P46736 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
BRCC3P46736 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
BRCC3P46736 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
BRCC3P46736 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.33■□□□□ 0.52
BRCC3P46736 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.33■□□□□ 0.52
BRCC3P46736 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.33■□□□□ 0.52
BRCC3P46736 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.33■□□□□ 0.52
BRCC3P46736 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.33■□□□□ 0.52
BRCC3P46736 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRCC3P46736 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRCC3P46736 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.32■□□□□ 0.52
BRCC3P46736 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRCC3P46736 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
BRCC3P46736 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRCC3P46736 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.32■□□□□ 0.52
BRCC3P46736 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRCC3P46736 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.32■□□□□ 0.52
BRCC3P46736 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRCC3P46736 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.32■□□□□ 0.52
BRCC3P46736 HTR5BP-201ENST00000430851 1154 ntBASIC18.32■□□□□ 0.52
BRCC3P46736 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.32■□□□□ 0.52
BRCC3P46736 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.32■□□□□ 0.52
BRCC3P46736 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.32■□□□□ 0.52
BRCC3P46736 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRCC3P46736 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.32■□□□□ 0.52
BRCC3P46736 YBX1P5-201ENST00000509441 847 ntBASIC18.32■□□□□ 0.52
BRCC3P46736 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.32■□□□□ 0.52
BRCC3P46736 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRCC3P46736 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.32■□□□□ 0.52
BRCC3P46736 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.32■□□□□ 0.52
BRCC3P46736 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.32■□□□□ 0.52
BRCC3P46736 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.32■□□□□ 0.52
BRCC3P46736 AL596442.2-201ENST00000610240 980 ntBASIC18.32■□□□□ 0.52
BRCC3P46736 AC007064.4-201ENST00000637740 555 ntBASIC18.32■□□□□ 0.52
BRCC3P46736 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRCC3P46736 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRCC3P46736 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRCC3P46736 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRCC3P46736 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
BRCC3P46736 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.32■□□□□ 0.52
BRCC3P46736 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRCC3P46736 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRCC3P46736 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRCC3P46736 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRCC3P46736 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
BRCC3P46736 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.31■□□□□ 0.52
BRCC3P46736 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRCC3P46736 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRCC3P46736 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
BRCC3P46736 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRCC3P46736 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.31■□□□□ 0.52
BRCC3P46736 AC074386.1-202ENST00000463561 864 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms