Protein–RNA interactions for Protein: P43234

CTSO, Cathepsin O, humanhuman

Predicted RBP Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSOP43234 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSOP43234 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSOP43234 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSOP43234 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSOP43234 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSOP43234 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.5■□□□□ 0.39
CTSOP43234 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CTSOP43234 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.5■□□□□ 0.39
CTSOP43234 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSOP43234 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.5■□□□□ 0.39
CTSOP43234 AC010327.4-202ENST00000591484 748 ntBASIC17.5■□□□□ 0.39
CTSOP43234 GGTLC5P-201ENST00000617623 998 ntBASIC17.5■□□□□ 0.39
CTSOP43234 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CTSOP43234 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CTSOP43234 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTSOP43234 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CTSOP43234 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSOP43234 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CTSOP43234 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
CTSOP43234 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTSOP43234 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.5■□□□□ 0.39
CTSOP43234 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.5■□□□□ 0.39
CTSOP43234 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CTSOP43234 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTSOP43234 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.49■□□□□ 0.39
CTSOP43234 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.49■□□□□ 0.39
CTSOP43234 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CTSOP43234 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSOP43234 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTSOP43234 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.49■□□□□ 0.39
CTSOP43234 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSOP43234 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CTSOP43234 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSOP43234 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.49■□□□□ 0.39
CTSOP43234 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CTSOP43234 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.49■□□□□ 0.39
CTSOP43234 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.49■□□□□ 0.39
CTSOP43234 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.49■□□□□ 0.39
CTSOP43234 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.49■□□□□ 0.39
CTSOP43234 AL513190.1-201ENST00000621254 727 ntBASIC17.49■□□□□ 0.39
CTSOP43234 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.49■□□□□ 0.39
CTSOP43234 AC010507.1-201ENST00000633895 436 ntBASIC17.49■□□□□ 0.39
CTSOP43234 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSOP43234 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSOP43234 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSOP43234 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.49■□□□□ 0.39
CTSOP43234 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSOP43234 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CTSOP43234 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSOP43234 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTSOP43234 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTSOP43234 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CTSOP43234 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSOP43234 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTSOP43234 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSOP43234 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSOP43234 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.48■□□□□ 0.39
CTSOP43234 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.48■□□□□ 0.39
CTSOP43234 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.48■□□□□ 0.39
CTSOP43234 PAWRP1-201ENST00000451083 565 ntBASIC17.48■□□□□ 0.39
CTSOP43234 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.48■□□□□ 0.39
CTSOP43234 SLC25A6P2-201ENST00000497974 877 ntBASIC17.48■□□□□ 0.39
CTSOP43234 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTSOP43234 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.48■□□□□ 0.39
CTSOP43234 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSOP43234 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTSOP43234 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.48■□□□□ 0.39
CTSOP43234 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSOP43234 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSOP43234 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CTSOP43234 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTSOP43234 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.47■□□□□ 0.39
CTSOP43234 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.47■□□□□ 0.39
CTSOP43234 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTSOP43234 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CTSOP43234 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSOP43234 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTSOP43234 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.47■□□□□ 0.39
CTSOP43234 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSOP43234 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSOP43234 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSOP43234 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.47■□□□□ 0.39
CTSOP43234 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSOP43234 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSOP43234 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
CTSOP43234 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CTSOP43234 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTSOP43234 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CTSOP43234 MIR1233-2-201ENST00000408138 82 ntBASIC17.47■□□□□ 0.39
CTSOP43234 MIR1233-1-201ENST00000408722 82 ntBASIC17.47■□□□□ 0.39
CTSOP43234 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CTSOP43234 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTSOP43234 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.47■□□□□ 0.39
CTSOP43234 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.47■□□□□ 0.39
CTSOP43234 AC002347.1-201ENST00000569543 541 ntBASIC17.47■□□□□ 0.39
CTSOP43234 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.47■□□□□ 0.39
CTSOP43234 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.47■□□□□ 0.39
CTSOP43234 AC055717.3-201ENST00000622967 595 ntBASIC17.47■□□□□ 0.39
CTSOP43234 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTSOP43234 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms