Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
KRT20P35900 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
KRT20P35900 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
KRT20P35900 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT20P35900 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT20P35900 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT20P35900 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
KRT20P35900 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
KRT20P35900 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT20P35900 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.49■□□□□ 0.23
KRT20P35900 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT20P35900 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT20P35900 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT20P35900 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
KRT20P35900 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT20P35900 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT20P35900 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.49■□□□□ 0.23
KRT20P35900 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
KRT20P35900 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT20P35900 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT20P35900 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT20P35900 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT20P35900 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT20P35900 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT20P35900 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT20P35900 LINC00265-3P-201ENST00000447588 903 ntBASIC16.49■□□□□ 0.23
KRT20P35900 RN7SL606P-201ENST00000472779 293 ntBASIC16.49■□□□□ 0.23
KRT20P35900 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT20P35900 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT20P35900 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT20P35900 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT20P35900 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.49■□□□□ 0.23
KRT20P35900 AP002414.4-201ENST00000589764 1148 ntBASIC16.49■□□□□ 0.23
KRT20P35900 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT20P35900 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT20P35900 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
KRT20P35900 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
KRT20P35900 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
KRT20P35900 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT20P35900 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
KRT20P35900 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.49■□□□□ 0.23
KRT20P35900 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.49■□□□□ 0.23
KRT20P35900 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.49■□□□□ 0.23
KRT20P35900 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
KRT20P35900 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT20P35900 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.49■□□□□ 0.23
KRT20P35900 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
KRT20P35900 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT20P35900 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KRT20P35900 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KRT20P35900 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT20P35900 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT20P35900 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT20P35900 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
KRT20P35900 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT20P35900 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
KRT20P35900 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
KRT20P35900 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT20P35900 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT20P35900 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.48■□□□□ 0.23
KRT20P35900 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
KRT20P35900 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT20P35900 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.48■□□□□ 0.23
KRT20P35900 AC246785.2-201ENST00000432512 513 ntBASIC16.48■□□□□ 0.23
KRT20P35900 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.48■□□□□ 0.23
KRT20P35900 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.48■□□□□ 0.23
KRT20P35900 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.48■□□□□ 0.23
KRT20P35900 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT20P35900 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.48■□□□□ 0.23
KRT20P35900 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT20P35900 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT20P35900 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.48■□□□□ 0.23
KRT20P35900 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.48■□□□□ 0.23
KRT20P35900 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT20P35900 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT20P35900 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.48■□□□□ 0.23
KRT20P35900 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
KRT20P35900 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
KRT20P35900 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
KRT20P35900 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT20P35900 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT20P35900 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.48■□□□□ 0.23
KRT20P35900 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT20P35900 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
KRT20P35900 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT20P35900 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT20P35900 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT20P35900 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT20P35900 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT20P35900 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
KRT20P35900 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT20P35900 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
KRT20P35900 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.47■□□□□ 0.23
KRT20P35900 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT20P35900 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
KRT20P35900 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT20P35900 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT20P35900 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT20P35900 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT20P35900 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms