Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.61■□□□□ 0.25
CCKBRP32239 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCKBRP32239 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCKBRP32239 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.61■□□□□ 0.25
CCKBRP32239 CYMP-203ENST00000474680 1263 ntBASIC16.61■□□□□ 0.25
CCKBRP32239 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.61■□□□□ 0.25
CCKBRP32239 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCKBRP32239 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.61■□□□□ 0.25
CCKBRP32239 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.61■□□□□ 0.25
CCKBRP32239 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCKBRP32239 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCKBRP32239 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCKBRP32239 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CCKBRP32239 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.61■□□□□ 0.25
CCKBRP32239 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCKBRP32239 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.61■□□□□ 0.25
CCKBRP32239 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCKBRP32239 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCKBRP32239 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCKBRP32239 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCKBRP32239 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCKBRP32239 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
CCKBRP32239 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CCKBRP32239 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.6■□□□□ 0.25
CCKBRP32239 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCKBRP32239 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCKBRP32239 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.6■□□□□ 0.25
CCKBRP32239 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCKBRP32239 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCKBRP32239 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCKBRP32239 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.6■□□□□ 0.25
CCKBRP32239 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CCKBRP32239 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCKBRP32239 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCKBRP32239 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CCKBRP32239 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCKBRP32239 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.6■□□□□ 0.25
CCKBRP32239 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.6■□□□□ 0.25
CCKBRP32239 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCKBRP32239 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.6■□□□□ 0.25
CCKBRP32239 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.6■□□□□ 0.25
CCKBRP32239 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.6■□□□□ 0.25
CCKBRP32239 AP002472.1-201ENST00000577490 586 ntBASIC16.6■□□□□ 0.25
CCKBRP32239 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.6■□□□□ 0.25
CCKBRP32239 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCKBRP32239 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCKBRP32239 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCKBRP32239 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCKBRP32239 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.6■□□□□ 0.25
CCKBRP32239 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CCKBRP32239 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCKBRP32239 AC135776.1-201ENST00000319817 2481 ntBASIC16.6■□□□□ 0.25
CCKBRP32239 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCKBRP32239 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCKBRP32239 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCKBRP32239 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CCKBRP32239 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCKBRP32239 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCKBRP32239 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCKBRP32239 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCKBRP32239 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCKBRP32239 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.59■□□□□ 0.25
CCKBRP32239 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCKBRP32239 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.59■□□□□ 0.25
CCKBRP32239 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCKBRP32239 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
CCKBRP32239 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCKBRP32239 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.59■□□□□ 0.25
CCKBRP32239 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CCKBRP32239 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CCKBRP32239 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCKBRP32239 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCKBRP32239 AC074386.1-202ENST00000463561 864 ntBASIC16.59■□□□□ 0.25
CCKBRP32239 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.59■□□□□ 0.25
CCKBRP32239 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.59■□□□□ 0.25
CCKBRP32239 AL031432.2-201ENST00000566714 459 ntBASIC16.59■□□□□ 0.25
CCKBRP32239 AL928711.1-201ENST00000570165 459 ntBASIC16.59■□□□□ 0.25
CCKBRP32239 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.59■□□□□ 0.25
CCKBRP32239 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.59■□□□□ 0.25
CCKBRP32239 AC023141.13-201ENST00000604991 943 ntBASIC16.59■□□□□ 0.25
CCKBRP32239 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.59■□□□□ 0.25
CCKBRP32239 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCKBRP32239 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCKBRP32239 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCKBRP32239 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCKBRP32239 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCKBRP32239 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CCKBRP32239 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCKBRP32239 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCKBRP32239 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CCKBRP32239 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCKBRP32239 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.58■□□□□ 0.25
CCKBRP32239 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.58■□□□□ 0.25
CCKBRP32239 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.58■□□□□ 0.25
CCKBRP32239 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CCKBRP32239 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.58■□□□□ 0.25
CCKBRP32239 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.58■□□□□ 0.24
CCKBRP32239 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCKBRP32239 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCKBRP32239 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms