Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.7■□□□□ 0.58
HOXC8P31273 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.7■□□□□ 0.58
HOXC8P31273 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC8P31273 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC8P31273 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC8P31273 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC8P31273 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC8P31273 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.7■□□□□ 0.58
HOXC8P31273 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC8P31273 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
HOXC8P31273 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC8P31273 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HOXC8P31273 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
HOXC8P31273 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HOXC8P31273 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
HOXC8P31273 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC8P31273 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC8P31273 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC8P31273 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC8P31273 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
HOXC8P31273 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC8P31273 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
HOXC8P31273 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC8P31273 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC8P31273 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC8P31273 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.69■□□□□ 0.58
HOXC8P31273 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.69■□□□□ 0.58
HOXC8P31273 AC069262.1-201ENST00000539058 672 ntBASIC18.69■□□□□ 0.58
HOXC8P31273 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.69■□□□□ 0.58
HOXC8P31273 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.69■□□□□ 0.58
HOXC8P31273 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC8P31273 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC8P31273 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.69■□□□□ 0.58
HOXC8P31273 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC8P31273 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC8P31273 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.69■□□□□ 0.58
HOXC8P31273 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC8P31273 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXC8P31273 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.69■□□□□ 0.58
HOXC8P31273 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
HOXC8P31273 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.69■□□□□ 0.58
HOXC8P31273 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
HOXC8P31273 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HOXC8P31273 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC8P31273 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC8P31273 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC8P31273 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.68■□□□□ 0.58
HOXC8P31273 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC8P31273 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
HOXC8P31273 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.68■□□□□ 0.58
HOXC8P31273 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC8P31273 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.68■□□□□ 0.58
HOXC8P31273 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.68■□□□□ 0.58
HOXC8P31273 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.68■□□□□ 0.58
HOXC8P31273 CNN2P2-201ENST00000443536 909 ntBASIC18.68■□□□□ 0.58
HOXC8P31273 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
HOXC8P31273 CNN2P3-201ENST00000450201 906 ntBASIC18.68■□□□□ 0.58
HOXC8P31273 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.68■□□□□ 0.58
HOXC8P31273 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.68■□□□□ 0.58
HOXC8P31273 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.68■□□□□ 0.58
HOXC8P31273 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.68■□□□□ 0.58
HOXC8P31273 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HOXC8P31273 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.68■□□□□ 0.58
HOXC8P31273 AL136317.3-201ENST00000618497 906 ntBASIC18.68■□□□□ 0.58
HOXC8P31273 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.68■□□□□ 0.58
HOXC8P31273 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC8P31273 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC8P31273 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC8P31273 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC8P31273 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC8P31273 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.68■□□□□ 0.58
HOXC8P31273 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC8P31273 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HOXC8P31273 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HOXC8P31273 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC8P31273 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC8P31273 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC8P31273 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.68■□□□□ 0.58
HOXC8P31273 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXC8P31273 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HOXC8P31273 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HOXC8P31273 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC8P31273 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
HOXC8P31273 AC116353.5-201ENST00000638148 1699 ntBASIC18.67■□□□□ 0.58
HOXC8P31273 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC8P31273 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC8P31273 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC8P31273 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC8P31273 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC8P31273 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.67■□□□□ 0.58
HOXC8P31273 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.67■□□□□ 0.58
HOXC8P31273 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXC8P31273 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC8P31273 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXC8P31273 AL035633.1-201ENST00000406139 838 ntBASIC18.67■□□□□ 0.58
HOXC8P31273 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.67■□□□□ 0.58
HOXC8P31273 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXC8P31273 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC8P31273 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXC8P31273 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms