Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC27P30260 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC27P30260 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC27P30260 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CDC27P30260 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.04■□□□□ 0.8
CDC27P30260 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDC27P30260 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC27P30260 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDC27P30260 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDC27P30260 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CDC27P30260 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC27P30260 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC27P30260 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CDC27P30260 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.04■□□□□ 0.8
CDC27P30260 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.04■□□□□ 0.8
CDC27P30260 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.04■□□□□ 0.8
CDC27P30260 FRMD8P1-201ENST00000440433 1524 ntBASIC20.04■□□□□ 0.8
CDC27P30260 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC27P30260 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDC27P30260 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.04■□□□□ 0.8
CDC27P30260 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.04■□□□□ 0.8
CDC27P30260 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
CDC27P30260 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDC27P30260 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDC27P30260 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.04■□□□□ 0.8
CDC27P30260 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CDC27P30260 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.04■□□□□ 0.8
CDC27P30260 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.04■□□□□ 0.8
CDC27P30260 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.04■□□□□ 0.8
CDC27P30260 AL139424.1-201ENST00000607572 797 ntBASIC20.04■□□□□ 0.8
CDC27P30260 AC107918.4-202ENST00000641623 219 ntBASIC20.04■□□□□ 0.8
CDC27P30260 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CDC27P30260 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC27P30260 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC27P30260 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC27P30260 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC27P30260 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CDC27P30260 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDC27P30260 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.03■□□□□ 0.8
CDC27P30260 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CDC27P30260 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CDC27P30260 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CDC27P30260 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC27P30260 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC27P30260 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC27P30260 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.03■□□□□ 0.8
CDC27P30260 MRPL3P1-201ENST00000400109 1033 ntBASIC20.03■□□□□ 0.8
CDC27P30260 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC27P30260 FAAHP1-202ENST00000446499 1238 ntBASIC20.03■□□□□ 0.8
CDC27P30260 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.03■□□□□ 0.8
CDC27P30260 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.03■□□□□ 0.8
CDC27P30260 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.03■□□□□ 0.8
CDC27P30260 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CDC27P30260 AL160237.2-201ENST00000556165 472 ntBASIC20.03■□□□□ 0.8
CDC27P30260 AC012640.2-201ENST00000561606 901 ntBASIC20.03■□□□□ 0.8
CDC27P30260 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.03■□□□□ 0.8
CDC27P30260 AC139887.3-201ENST00000568585 713 ntBASIC20.03■□□□□ 0.8
CDC27P30260 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CDC27P30260 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.03■□□□□ 0.8
CDC27P30260 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC27P30260 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC27P30260 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CDC27P30260 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC27P30260 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC27P30260 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC27P30260 AC006504.4-201ENST00000592118 1568 ntBASIC20.03■□□□□ 0.8
CDC27P30260 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC27P30260 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC27P30260 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.03■□□□□ 0.8
CDC27P30260 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDC27P30260 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDC27P30260 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC27P30260 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CDC27P30260 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDC27P30260 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC27P30260 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC27P30260 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CDC27P30260 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC27P30260 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.02■□□□□ 0.8
CDC27P30260 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.02■□□□□ 0.8
CDC27P30260 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC27P30260 KRT18P67-201ENST00000432816 1264 ntBASIC20.02■□□□□ 0.8
CDC27P30260 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.02■□□□□ 0.8
CDC27P30260 GPR89P-201ENST00000407924 1495 ntBASIC20.02■□□□□ 0.8
CDC27P30260 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.02■□□□□ 0.8
CDC27P30260 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC27P30260 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.02■□□□□ 0.8
CDC27P30260 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC27P30260 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CDC27P30260 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.02■□□□□ 0.79
CDC27P30260 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CDC27P30260 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.02■□□□□ 0.79
CDC27P30260 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC27P30260 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC27P30260 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.01■□□□□ 0.79
CDC27P30260 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CDC27P30260 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC27P30260 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC27P30260 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CDC27P30260 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms