Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PTPN6P29350 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN6P29350 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN6P29350 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
PTPN6P29350 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PTPN6P29350 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.43■□□□□ 0.22
PTPN6P29350 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.43■□□□□ 0.22
PTPN6P29350 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.43■□□□□ 0.22
PTPN6P29350 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.43■□□□□ 0.22
PTPN6P29350 CLEC4GP1-201ENST00000596555 870 ntBASIC16.43■□□□□ 0.22
PTPN6P29350 AL138831.2-201ENST00000606564 490 ntBASIC16.43■□□□□ 0.22
PTPN6P29350 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.43■□□□□ 0.22
PTPN6P29350 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN6P29350 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.43■□□□□ 0.22
PTPN6P29350 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PTPN6P29350 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.43■□□□□ 0.22
PTPN6P29350 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN6P29350 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN6P29350 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
PTPN6P29350 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PTPN6P29350 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PTPN6P29350 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN6P29350 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN6P29350 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN6P29350 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
PTPN6P29350 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PTPN6P29350 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN6P29350 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PTPN6P29350 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN6P29350 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN6P29350 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN6P29350 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.42■□□□□ 0.22
PTPN6P29350 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN6P29350 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN6P29350 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.42■□□□□ 0.22
PTPN6P29350 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN6P29350 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN6P29350 MIR3652-201ENST00000579335 131 ntBASIC16.42■□□□□ 0.22
PTPN6P29350 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN6P29350 AC005336.2-201ENST00000593183 939 ntBASIC16.42■□□□□ 0.22
PTPN6P29350 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN6P29350 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN6P29350 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.42■□□□□ 0.22
PTPN6P29350 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
PTPN6P29350 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN6P29350 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN6P29350 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.42■□□□□ 0.22
PTPN6P29350 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN6P29350 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN6P29350 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN6P29350 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN6P29350 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN6P29350 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN6P29350 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN6P29350 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.42■□□□□ 0.22
PTPN6P29350 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN6P29350 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN6P29350 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
PTPN6P29350 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.41■□□□□ 0.22
PTPN6P29350 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.41■□□□□ 0.22
PTPN6P29350 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN6P29350 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PTPN6P29350 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN6P29350 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN6P29350 AC233702.3-201ENST00000578656 1387 ntBASIC16.41■□□□□ 0.22
PTPN6P29350 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN6P29350 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN6P29350 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN6P29350 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN6P29350 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.41■□□□□ 0.22
PTPN6P29350 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PTPN6P29350 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN6P29350 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.41■□□□□ 0.22
PTPN6P29350 AC122714.2-201ENST00000502787 707 ntBASIC16.41■□□□□ 0.22
PTPN6P29350 AP000867.3-201ENST00000524675 377 ntBASIC16.41■□□□□ 0.22
PTPN6P29350 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.41■□□□□ 0.22
PTPN6P29350 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN6P29350 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
PTPN6P29350 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.41■□□□□ 0.22
PTPN6P29350 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN6P29350 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN6P29350 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN6P29350 AC092068.3-201ENST00000587894 2016 ntBASIC16.41■□□□□ 0.22
PTPN6P29350 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.41■□□□□ 0.22
PTPN6P29350 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN6P29350 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PTPN6P29350 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN6P29350 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN6P29350 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN6P29350 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
PTPN6P29350 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN6P29350 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PTPN6P29350 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN6P29350 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN6P29350 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN6P29350 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
PTPN6P29350 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PTPN6P29350 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN6P29350 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN6P29350 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms