Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
MMP11P24347 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.44■□□□□ 0.22
MMP11P24347 AC006557.2-201ENST00000592985 1240 ntBASIC16.44■□□□□ 0.22
MMP11P24347 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP11P24347 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP11P24347 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
MMP11P24347 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP11P24347 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MMP11P24347 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP11P24347 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
MMP11P24347 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP11P24347 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MMP11P24347 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MMP11P24347 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MMP11P24347 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
MMP11P24347 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
MMP11P24347 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.44■□□□□ 0.22
MMP11P24347 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MMP11P24347 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP11P24347 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP11P24347 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.43■□□□□ 0.22
MMP11P24347 AC004817.3-201ENST00000602957 2129 ntBASIC16.43■□□□□ 0.22
MMP11P24347 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP11P24347 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP11P24347 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MMP11P24347 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP11P24347 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP11P24347 AC009949.1-201ENST00000623048 1830 ntBASIC16.43■□□□□ 0.22
MMP11P24347 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP11P24347 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.43■□□□□ 0.22
MMP11P24347 AP001094.4-201ENST00000579008 2176 ntBASIC16.43■□□□□ 0.22
MMP11P24347 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP11P24347 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
MMP11P24347 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
MMP11P24347 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MMP11P24347 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP11P24347 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP11P24347 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP11P24347 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP11P24347 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
MMP11P24347 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.43■□□□□ 0.22
MMP11P24347 POLD2P1-201ENST00000511220 997 ntBASIC16.43■□□□□ 0.22
MMP11P24347 RNA5SP415-201ENST00000517246 115 ntBASIC16.43■□□□□ 0.22
MMP11P24347 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.43■□□□□ 0.22
MMP11P24347 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.43■□□□□ 0.22
MMP11P24347 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP11P24347 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.43■□□□□ 0.22
MMP11P24347 TERC-201ENST00000602385 541 ntBASIC16.43■□□□□ 0.22
MMP11P24347 GPALPP1-207ENST00000611650 899 ntBASIC16.43■□□□□ 0.22
MMP11P24347 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP11P24347 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP11P24347 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP11P24347 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP11P24347 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.43■□□□□ 0.22
MMP11P24347 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.43■□□□□ 0.22
MMP11P24347 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MMP11P24347 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP11P24347 AC133963.1-201ENST00000504166 1679 ntBASIC16.43■□□□□ 0.22
MMP11P24347 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.43■□□□□ 0.22
MMP11P24347 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.43■□□□□ 0.22
MMP11P24347 PMS2P7-201ENST00000506558 1336 ntBASIC16.43■□□□□ 0.22
MMP11P24347 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP11P24347 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP11P24347 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.42■□□□□ 0.22
MMP11P24347 AC132938.5-201ENST00000624980 1813 ntBASIC16.42■□□□□ 0.22
MMP11P24347 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP11P24347 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
MMP11P24347 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP11P24347 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.42■□□□□ 0.22
MMP11P24347 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.42■□□□□ 0.22
MMP11P24347 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP11P24347 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.42■□□□□ 0.22
MMP11P24347 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.42■□□□□ 0.22
MMP11P24347 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.42■□□□□ 0.22
MMP11P24347 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP11P24347 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP11P24347 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP11P24347 AC003669.1-201ENST00000334569 611 ntBASIC16.42■□□□□ 0.22
MMP11P24347 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.42■□□□□ 0.22
MMP11P24347 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.42■□□□□ 0.22
MMP11P24347 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.42■□□□□ 0.22
MMP11P24347 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.42■□□□□ 0.22
MMP11P24347 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.42■□□□□ 0.22
MMP11P24347 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.42■□□□□ 0.22
MMP11P24347 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.42■□□□□ 0.22
MMP11P24347 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
MMP11P24347 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.42■□□□□ 0.22
MMP11P24347 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.42■□□□□ 0.22
MMP11P24347 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
MMP11P24347 Z83851.2-201ENST00000609564 659 ntBASIC16.42■□□□□ 0.22
MMP11P24347 AC019129.2-201ENST00000609837 1235 ntBASIC16.42■□□□□ 0.22
MMP11P24347 AC006538.3-201ENST00000612495 578 ntBASIC16.42■□□□□ 0.22
MMP11P24347 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
MMP11P24347 AL589182.2-201ENST00000619332 1049 ntBASIC16.42■□□□□ 0.22
MMP11P24347 MIR1199-201ENST00000621445 119 ntBASIC16.42■□□□□ 0.22
MMP11P24347 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP11P24347 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP11P24347 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
MMP11P24347 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP11P24347 AL138688.1-201ENST00000624851 1594 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms